RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 MMP1P03956 469 aa3.7□□□□□ -1.82
APP-207ENST00000415997 FGFR2P21802 821 aa3.7□□□□□ -1.82
APP-207ENST00000415997 GDF5P43026 501 aa3.7□□□□□ -1.82
APP-207ENST00000415997 RBM25P49756 843 aaKnown RBP3.7□□□□□ -1.82
APP-207ENST00000415997 NDUFV1P49821 464 aa3.7□□□□□ -1.82
APP-207ENST00000415997 SEPHS1P49903 392 aa3.7□□□□□ -1.82
APP-207ENST00000415997 RBL2Q08999 1139 aa3.7□□□□□ -1.82
APP-207ENST00000415997 PICALMQ13492 652 aa3.7□□□□□ -1.82
APP-207ENST00000415997 ACVR2BQ13705 512 aa3.7□□□□□ -1.82
APP-207ENST00000415997 KCNC3Q14003 757 aa3.7□□□□□ -1.82
APP-207ENST00000415997 COG2Q14746 738 aa3.7□□□□□ -1.82
APP-207ENST00000415997 SLC9A5Q14940 896 aa3.7□□□□□ -1.82
APP-207ENST00000415997 FSCN1Q16658 493 aaKnown RBP3.7□□□□□ -1.82
APP-207ENST00000415997 ZNF528Q3MIS6 628 aa3.7□□□□□ -1.82
APP-207ENST00000415997 ANKRD39Q53RE8 183 aa3.7□□□□□ -1.82
APP-207ENST00000415997 CAVIN4Q5BKX8 364 aa3.7□□□□□ -1.82
APP-207ENST00000415997 CD300LDQ6UXZ3 194 aa3.7□□□□□ -1.82
APP-207ENST00000415997 UNC5AQ6ZN44 842 aa3.7□□□□□ -1.82
APP-207ENST00000415997 FAM124AQ86V42 546 aa3.7□□□□□ -1.82
APP-207ENST00000415997 SLITRK4Q8IW52 837 aa3.7□□□□□ -1.82
APP-207ENST00000415997 MB21D1Q8N884 522 aa3.7□□□□□ -1.82
APP-207ENST00000415997 PI4KAP1Q8N8J0 262 aa3.7□□□□□ -1.82
APP-207ENST00000415997 ZBTB44Q8NCP5 570 aa3.7□□□□□ -1.82
APP-207ENST00000415997 VN1R2Q8NFZ6 395 aa3.7□□□□□ -1.82
APP-207ENST00000415997 ZNF384Q8TF68 577 aa3.7□□□□□ -1.82
APP-207ENST00000415997 KISS1RQ969F8 398 aaPredicted RBP3.7□□□□□ -1.82
APP-207ENST00000415997 RNF34Q969K3 372 aa3.7□□□□□ -1.82
APP-207ENST00000415997 TSPAN17Q96FV3 270 aa3.7□□□□□ -1.82
APP-207ENST00000415997 FGD4Q96M96 766 aa3.7□□□□□ -1.82
APP-207ENST00000415997 GORASP1Q9BQQ3 440 aa3.7□□□□□ -1.82
APP-207ENST00000415997 POLR3GLQ9BT43 218 aa3.7□□□□□ -1.82
APP-207ENST00000415997 NT5C1AQ9BXI3 368 aa3.7□□□□□ -1.82
APP-207ENST00000415997 SRRTQ9BXP5 876 aaKnown RBP3.7□□□□□ -1.82
APP-207ENST00000415997 PUS3Q9BZE2 481 aaKnown RBP3.7□□□□□ -1.82
APP-207ENST00000415997 FTOQ9C0B1 505 aaKnown RBP eCLIP3.7□□□□□ -1.823e-6■□□□□ 11.1
APP-207ENST00000415997 MFSD1Q9H3U5 465 aa3.7□□□□□ -1.82
APP-207ENST00000415997 SPC25Q9HBM1 224 aa3.7□□□□□ -1.82
APP-207ENST00000415997 ERVK-5Q9HDB9 667 aa3.7□□□□□ -1.82
APP-207ENST00000415997 NCDNQ9UBB6 729 aa3.7□□□□□ -1.82
APP-207ENST00000415997 BARX2Q9UMQ3 279 aaPredicted RBP3.7□□□□□ -1.82
APP-207ENST00000415997 SETD2Q9BYW2 2564 aaPredicted RBP3.7□□□□□ -1.82
APP-207ENST00000415997 LRRK2Q5S007 2527 aa3.7□□□□□ -1.82
APP-207ENST00000415997 LAMA1P25391 3075 aa3.69□□□□□ -1.82
APP-207ENST00000415997 DDX3XO00571 662 aaKnown RBP eCLIP3.69□□□□□ -1.82
APP-207ENST00000415997 EFCAB14O75071 495 aa3.69□□□□□ -1.82
APP-207ENST00000415997 LRP3O75074 770 aa3.69□□□□□ -1.82
APP-207ENST00000415997 DDX58O95786 925 aaKnown RBP3.69□□□□□ -1.82
APP-207ENST00000415997 MAP4K4O95819 1239 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 SLC25A27O95847 323 aa3.69□□□□□ -1.82
APP-207ENST00000415997 NTRK1P04629 796 aa3.69□□□□□ -1.82
APP-207ENST00000415997 RB1P06400 928 aa3.69□□□□□ -1.82
APP-207ENST00000415997 DNAJB1P25685 340 aa3.69□□□□□ -1.82
APP-207ENST00000415997 LIMK1P53667 647 aa3.69□□□□□ -1.82
APP-207ENST00000415997 USP14P54578 494 aa3.69□□□□□ -1.82
APP-207ENST00000415997 TMEM132BQ14DG7 1078 aa3.69□□□□□ -1.82
APP-207ENST00000415997 CCDC6Q16204 474 aa3.69□□□□□ -1.82
APP-207ENST00000415997 GNPTABQ3T906 1256 aa3.69□□□□□ -1.82
APP-207ENST00000415997 EEF1DP3Q658K8 133 aa3.69□□□□□ -1.82
APP-207ENST00000415997 BORAQ6PGQ7 559 aa3.69□□□□□ -1.82
APP-207ENST00000415997 TMEM184AQ6ZMB5 413 aa3.69□□□□□ -1.82
APP-207ENST00000415997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.69□□□□□ -1.823e-8■□□□□ 9.1
APP-207ENST00000415997 ERICH6Q7L0X2 663 aa3.69□□□□□ -1.82
APP-207ENST00000415997 ADGRD2Q7Z7M1 963 aa3.69□□□□□ -1.82
APP-207ENST00000415997 VPS37DQ86XT2 251 aa3.69□□□□□ -1.82
APP-207ENST00000415997 C1orf210Q8IVY1 113 aa3.69□□□□□ -1.82
APP-207ENST00000415997 LGI4Q8N135 537 aa3.69□□□□□ -1.82
APP-207ENST00000415997 FAM26EQ8N5C1 309 aa3.69□□□□□ -1.82
APP-207ENST00000415997 AFAP1L1Q8TED9 768 aa3.69□□□□□ -1.82
APP-207ENST00000415997 CPA5Q8WXQ8 436 aa3.69□□□□□ -1.82
APP-207ENST00000415997 RIN2Q8WYP3 895 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 ZCCHC14Q8WYQ9 949 aaKnown RBP3.69□□□□□ -1.82
APP-207ENST00000415997 DVL3Q92997 716 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 CFAP53Q96M91 514 aa3.69□□□□□ -1.82
APP-207ENST00000415997 MMP19Q99542 508 aa3.69□□□□□ -1.82
APP-207ENST00000415997 MCMBPQ9BTE3 642 aa3.69□□□□□ -1.82
APP-207ENST00000415997 C11orf84Q9BUA3 381 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 ABHD16BQ9H3Z7 469 aa3.69□□□□□ -1.82
APP-207ENST00000415997 RPAP3Q9H6T3 665 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 CNNM1Q9NRU3 951 aa3.69□□□□□ -1.82
APP-207ENST00000415997 HOXC10Q9NYD6 342 aa3.69□□□□□ -1.82
APP-207ENST00000415997 PI4KBQ9UBF8 816 aa3.69□□□□□ -1.82
APP-207ENST00000415997 ZHX1Q9UKY1 873 aaPredicted RBP3.69□□□□□ -1.82
APP-207ENST00000415997 PCDHGA2Q9Y5H1 932 aa3.69□□□□□ -1.82
APP-207ENST00000415997 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.69□□□□□ -1.82
APP-207ENST00000415997 ZNFX1Q9P2E3 1918 aaKnown RBP3.69□□□□□ -1.82
APP-207ENST00000415997 SCN10AQ9Y5Y9 1956 aa3.69□□□□□ -1.82
APP-207ENST00000415997 MICAL3Q7RTP6 2002 aa3.68□□□□□ -1.82
APP-207ENST00000415997 NPHP3-ACAD11A0A0J9YXS1 232 aa3.68□□□□□ -1.82
APP-207ENST00000415997 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.68□□□□□ -1.82
APP-207ENST00000415997 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.68□□□□□ -1.82
APP-207ENST00000415997 C2orf71A6NGG8 1288 aa3.68□□□□□ -1.82
APP-207ENST00000415997 MROH6A6NGR9 719 aa3.68□□□□□ -1.82
APP-207ENST00000415997 C2CD4DB7Z1M9 353 aa3.68□□□□□ -1.82
APP-207ENST00000415997 AURKAO14965 403 aa3.68□□□□□ -1.82
APP-207ENST00000415997 ARHGAP6O43182 974 aa3.68□□□□□ -1.82
APP-207ENST00000415997 PDE8BO95263 885 aa3.68□□□□□ -1.82
APP-207ENST00000415997 PARNO95453 639 aaKnown RBP3.68□□□□□ -1.82
APP-207ENST00000415997 AMHP03971 560 aa3.68□□□□□ -1.82
APP-207ENST00000415997 C8BP07358 591 aa3.68□□□□□ -1.82
APP-207ENST00000415997 GLULP15104 373 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms