RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 GTF2A2P52657 109 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 TMEM132BQ14DG7 1078 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 SNX30Q5VWJ9 437 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 AGGF1Q8N302 714 aaeCLIP21.63■■□□□ 1.05
AP1S3-205ENST00000415298 REPS2Q8NFH8 660 aa21.63■■□□□ 1.05
AP1S3-205ENST00000415298 ATXN2LQ8WWM7 1075 aaKnown RBP21.63■■□□□ 1.05
AP1S3-205ENST00000415298 TUT1Q9H6E5 874 aaKnown RBP21.63■■□□□ 1.05
AP1S3-205ENST00000415298 RPL26L1Q9UNX3 145 aaKnown RBP21.63■■□□□ 1.05
AP1S3-205ENST00000415298 DCDC2CA8MYV0 355 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 M0R2N6 131 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 STRNO43815 780 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 ZBED4O75132 1171 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 NOSTRINQ8IVI9 506 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 ST13P4Q8IZP2 240 aaPredicted RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PPFIBP2Q8ND30 876 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 FAM13CQ8NE31 585 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 CASKIN2Q8WXE0 1202 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 TNFRSF25Q93038 417 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 NMD3Q96D46 503 aaKnown RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 SPATA17Q96L03 361 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PCDHA6Q9UN73 950 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PCDHA8Q9Y5H6 950 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 UNC5CO95185 931 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 TUBA4AP68366 448 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 RESP18Q5W5W9 173 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PATL1Q86TB9 770 aaKnown RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 ZBED8Q8IZ13 594 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PURBQ96QR8 312 aaKnown RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 FOXP1Q9H334 677 aaPredicted RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 PSTPIP2Q9H939 334 aa21.62■■□□□ 1.05
AP1S3-205ENST00000415298 HBS1LQ9Y450 684 aaKnown RBP21.62■■□□□ 1.05
AP1S3-205ENST00000415298 E9PBE3 544 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 ICAM1P05362 532 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 CETPP11597 493 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 CHN1P15882 459 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 BBS5Q8N3I7 341 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 NSMCE3Q96MG7 304 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 C2orf49Q9BVC5 232 aaPredicted RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 RBM12Q9NTZ6 932 aaKnown RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 DDX43Q9NXZ2 648 aaKnown RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 ZNF214Q9UL59 606 aaPredicted RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 GOLGA8TH3BQL2 631 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 TNFRSF10AO00220 468 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 DGKIO75912 1065 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 ALAS1P13196 640 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 FSTL1Q12841 308 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 ZBTB17Q13105 803 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 CCDC6Q16204 474 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 ZCWPW2Q504Y3 356 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 PIK3AP1Q6ZUJ8 805 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 GRAMD2AQ8IUY3 354 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 EIF1ADQ8N9N8 165 aaKnown RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 STARD8Q92502 1023 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 TLCD1Q96CP7 247 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 MED15Q96RN5 788 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 HEPHQ9BQS7 1158 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 R3HDMLQ9H3Y0 253 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 EPB41L1Q9H4G0 881 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 C6orf50Q9HD87 102 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 C6orf203Q9P0P8 240 aaPredicted RBP21.61■■□□□ 1.05
AP1S3-205ENST00000415298 MAN1B1Q9UKM7 699 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 TFR2Q9UP52 801 aa21.61■■□□□ 1.05
AP1S3-205ENST00000415298 FAM155AB1AL88 458 aaPredicted RBP21.6■■□□□ 1.05
AP1S3-205ENST00000415298 hCG_1984214I3L0E3 225 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 PDHXO00330 501 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 HOXA13P31271 388 aaPredicted RBP21.6■■□□□ 1.05
AP1S3-205ENST00000415298 HTRA3P83110 453 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 E2F2Q14209 437 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 UAP1Q16222 522 aaPredicted RBP21.6■■□□□ 1.05
AP1S3-205ENST00000415298 ARL13BQ3SXY8 428 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 CYP4F22Q6NT55 531 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 B3GNT6Q6ZMB0 384 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 NUP93Q8N1F7 819 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 HSPBAP1Q96EW2 488 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 TXLNGQ9NUQ3 528 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 TRIM17Q9Y577 477 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 UBL4AP11441 157 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 CALML3P27482 149 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 ERCC5P28715 1186 aaPredicted RBP21.6■■□□□ 1.05
AP1S3-205ENST00000415298 ZFYVE27Q5T4F4 411 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 METTL21CQ5VZV1 264 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 LRMDAQ9H2I8 198 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 TXNRD2Q9NNW7 524 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.6■■□□□ 1.05
AP1S3-205ENST00000415298 CAPN6Q9Y6Q1 641 aa21.6■■□□□ 1.05
AP1S3-205ENST00000415298 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 ZSCAN5CA6NGD5 496 aaPredicted RBP21.59■■□□□ 1.05
AP1S3-205ENST00000415298 MEIS2O14770 477 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 AFPP02771 609 aaKnown RBP21.59■■□□□ 1.05
AP1S3-205ENST00000415298 GNA11P29992 359 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 TOB1P50616 345 aaPredicted RBP21.59■■□□□ 1.05
AP1S3-205ENST00000415298 ADCY7P51828 1080 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 SUZ12Q15022 739 aaKnown RBP21.59■■□□□ 1.05
AP1S3-205ENST00000415298 KAZNQ674X7 775 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 PHLDB2Q86SQ0 1253 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 PPP1R10Q96QC0 940 aaKnown RBP21.59■■□□□ 1.05
AP1S3-205ENST00000415298 RIC8AQ9NPQ8 531 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 HYOU1Q9Y4L1 999 aa21.59■■□□□ 1.05
AP1S3-205ENST00000415298 SLC30A1Q9Y6M5 507 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms