RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FBXO21O94952 628 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 SAT1P21673 171 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 CDR2Q01850 454 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 ASCC2Q9H1I8 757 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 Q9H521 79 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 PCDHB7Q9Y5E2 793 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 EGFRP00533 1210 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 SLC9A1P19634 815 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 UGP2Q16851 508 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 LRRC71Q8N4P6 559 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 ACTR5Q9H9F9 607 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 MRGBPQ9NV56 204 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 H3BRB1 525 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 NPTXRO95502 500 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 SPOPLQ6IQ16 392 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TAB3Q8N5C8 712 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 FEZF2Q8TBJ5 459 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 SEPT8Q92599 483 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 HEMGNQ9BXL5 484 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 TUT1Q9H6E5 874 aaKnown RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 ITGA11Q9UKX5 1188 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 BAG5Q9UL15 447 aa12.62□□□□□ -0.39
PTPRF-205ENST00000414879 NOVA2Q9UNW9 492 aaKnown RBP12.62□□□□□ -0.39
PTPRF-205ENST00000414879 CREB3O43889 395 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 GPD1P21695 349 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SULT1E1P49888 294 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 KRT17Q04695 432 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 PDK1Q15118 436 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SLITRK1Q96PX8 696 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 DPP7Q9UHL4 492 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SLC15A5A6NIM6 579 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 PSTPIP1O43586 416 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 KLRC1P26715 233 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SLC8A1P32418 973 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 LHX1P48742 406 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 RARRES1P49788 294 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 GRIN1Q05586 938 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 DBN1Q16643 649 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 PLAAQ9Y263 795 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 ATP5HO75947 161 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
PTPRF-205ENST00000414879 SH3BGRP55822 239 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-205ENST00000414879 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
PTPRF-205ENST00000414879 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 ERVK-24P63145 666 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 ZNF235Q14590 738 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
PTPRF-205ENST00000414879 MMEL1Q495T6 779 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 TTC8Q8TAM2 541 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 ARHGEF26Q96DR7 871 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 PAK5Q9P286 719 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 EPS15L1Q9UBC2 864 aa12.61□□□□□ -0.39
PTPRF-205ENST00000414879 DCTN3O75935 186 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 GPS1Q13098 491 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 AGPAT5Q9NUQ2 364 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-205ENST00000414879 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 NHSL1Q5SYE7 1610 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 E4F1Q66K89 784 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-205ENST00000414879 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 CRLF3Q8IUI8 442 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 ALKBH8Q96BT7 664 aaKnown RBP12.6□□□□□ -0.39
PTPRF-205ENST00000414879 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 CHP1Q99653 195 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 TTC4O95801 387 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 CYP24A1Q07973 514 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 REPS2Q8NFH8 660 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 GRAMD1AQ96CP6 724 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 LCP1P13796 627 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 PON1P27169 355 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 PCK1P35558 622 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 SERPINB9P50453 376 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 LMBRD2Q68DH5 695 aaPredicted RBP12.6□□□□□ -0.39
PTPRF-205ENST00000414879 SCFD1Q8WVM8 642 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
PTPRF-205ENST00000414879 VCX3AQ9NNX9 186 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
PTPRF-205ENST00000414879 FAM170AA1A519 330 aa12.59□□□□□ -0.39
PTPRF-205ENST00000414879 C3orf70A6NLC5 250 aaPredicted RBP12.59□□□□□ -0.39
PTPRF-205ENST00000414879 ZMYND10O75800 440 aa12.59□□□□□ -0.39
PTPRF-205ENST00000414879 CTSHP09668 335 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms