RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ENGASEQ8NFI3 743 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
CHD1-202ENST00000414220 SLC22A17Q8WUG5 538 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 SMARCE1Q969G3 411 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 ANKRD36BP1Q96IX9 119 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 SUSD3Q96L08 255 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 B3GALT6Q96L58 329 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 NECTIN4Q96NY8 510 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 UHRF1Q96T88 793 aaPredicted RBP15.92■□□□□ 0.14
CHD1-202ENST00000414220 PLEKHA4Q9H4M7 779 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 SFXN1Q9H9B4 322 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 BACE2Q9Y5Z0 518 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 TCHHQ07283 1943 aa15.92■□□□□ 0.14
CHD1-202ENST00000414220 MYO7AQ13402 2215 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 MEFVO15553 781 aaPredicted RBP15.91■□□□□ 0.14
CHD1-202ENST00000414220 TGFB1I1O43294 461 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 TNNC2P02585 160 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 EPCAMP16422 314 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 MTHFRP42898 656 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 CYP2J2P51589 502 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 UBE2HP62256 183 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 SNW1Q13573 536 aaKnown RBP15.91■□□□□ 0.14
CHD1-202ENST00000414220 MYBPC2Q14324 1141 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 SNRNP35Q16560 246 aaKnown RBP15.91■□□□□ 0.14
CHD1-202ENST00000414220 ATAT1Q5SQI0 421 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 ZNF280DQ6N043 979 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 PRSS55Q6UWB4 352 aaPredicted RBP15.91■□□□□ 0.14
CHD1-202ENST00000414220 METTL23Q86XA0 190 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 PALB2Q86YC2 1186 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 SMRP1Q8NCR6 262 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 KIAA0895Q8NCT3 520 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 C3orf58Q8NDZ4 430 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 RIPOR3Q96MK2 946 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 PCDHB8Q9UN66 801 aa15.91■□□□□ 0.14
CHD1-202ENST00000414220 CITO14578 2027 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 I3L4J1 428 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 DLL1O00548 723 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 ODC1P11926 461 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 IL9P15248 144 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 RPL13P26373 211 aaKnown RBP15.9■□□□□ 0.14
CHD1-202ENST00000414220 TKTP29401 623 aaKnown RBP15.9■□□□□ 0.14
CHD1-202ENST00000414220 HOXD13P35453 343 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 TAF6P49848 677 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 PNOCQ13519 176 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 SMAD2Q15796 467 aaKnown RBP15.9■□□□□ 0.14
CHD1-202ENST00000414220 DUOXA2Q1HG44 320 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 SV2CQ496J9 727 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 LIN9Q5TKA1 542 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 C9orf57Q5W0N0 161 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 CYP26C1Q6V0L0 522 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 GLYCTKQ8IVS8 523 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 GUF1Q8N442 669 aaKnown RBP15.9■□□□□ 0.14
CHD1-202ENST00000414220 RDH13Q8NBN7 331 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 VN1R2Q8NFZ6 395 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
CHD1-202ENST00000414220 ADAM7Q9H2U9 754 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 MTRRQ9UBK8 725 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 DSEQ9UL01 958 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 FRMD4BQ9Y2L6 1034 aa15.9■□□□□ 0.14
CHD1-202ENST00000414220 PIRO00625 290 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 RPL17P18621 184 aaKnown RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 TNNI1P19237 187 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 ELF1P32519 619 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 OR1D2P34982 312 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 PPP1R2P41236 205 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 LILRA4P59901 499 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 RBP5P82980 135 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 RBM10P98175 930 aaKnown RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 YWHAHQ04917 246 aaPredicted RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 STIM1Q13586 685 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 CTXN3Q4LDR2 81 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 VARS2Q5ST30 1063 aaKnown RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 RARS2Q5T160 578 aaKnown RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 SYCE2Q6PIF2 218 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 CD300LGQ6UXG3 332 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 RTL10Q7L3V2 364 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 CBWD2Q8IUF1 395 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 WDR49Q8IV35 697 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 CSGALNACT2Q8N6G5 542 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 KREMEN2Q8NCW0 462 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 GBP4Q96PP9 640 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 CLSTN3Q9BQT9 956 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 APOL5Q9BWW9 433 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 MAN1C1Q9NR34 630 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 ITGA11Q9UKX5 1188 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 USP15Q9Y4E8 981 aaPredicted RBP15.89■□□□□ 0.13
CHD1-202ENST00000414220 CDY1Q9Y6F8 540 aa15.89■□□□□ 0.13
CHD1-202ENST00000414220 ANO9A1A5B4 782 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 GOLGA6L22H0YM25 854 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 M0QZQ0 153 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 TGM5O43548 720 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 KRT19P08727 400 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 TYMPP19971 482 aa15.88■□□□□ 0.13
CHD1-202ENST00000414220 SSTR3P32745 418 aaPredicted RBP15.88■□□□□ 0.13
CHD1-202ENST00000414220 GUCY2FP51841 1108 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms