RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CEP72Q9P209 647 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 AFF4Q9UHB7 1163 aaKnown RBP13.33□□□□□ -0.28
LIMS2-210ENST00000413578 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
LIMS2-210ENST00000413578 PRRG1O14668 218 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 VNN2O95498 520 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 MCF2P10911 925 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 PSMC3P17980 439 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 ELF1P32519 619 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
LIMS2-210ENST00000413578 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
LIMS2-210ENST00000413578 PEX3P56589 373 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 OSTNP61366 133 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 GUCY1B3Q02153 619 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 GAS6Q14393 721 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 BEST2Q8NFU1 509 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 IRF7Q92985 503 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
LIMS2-210ENST00000413578 C18orf25Q96B23 403 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-210ENST00000413578 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
LIMS2-210ENST00000413578 KIAA1024Q9UPX6 916 aa13.32□□□□□ -0.28
LIMS2-210ENST00000413578 CHRNB1P11230 501 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 VIPR2P41587 438 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 TRAPPC10P48553 1259 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
LIMS2-210ENST00000413578 ARPP19P56211 112 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 PDIA5Q14554 519 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 SAFBQ15424 915 aaKnown RBP eCLIP13.31□□□□□ -0.28
LIMS2-210ENST00000413578 CTXN3Q4LDR2 81 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 ZNF280DQ6N043 979 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 RSPRY1Q96DX4 576 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 ACAP3Q96P50 834 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 NTPCRQ9BSD7 190 aaKnown RBP13.31□□□□□ -0.28
LIMS2-210ENST00000413578 RTKNQ9BST9 563 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 RUSC1Q9BVN2 902 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
LIMS2-210ENST00000413578 LRWD1Q9UFC0 647 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 NDRG2Q9UN36 371 aaKnown RBP13.31□□□□□ -0.28
LIMS2-210ENST00000413578 PIAS3Q9Y6X2 628 aa13.31□□□□□ -0.28
LIMS2-210ENST00000413578 E9PMD0 336 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 HIP1RO75146 1068 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 GDI1P31150 447 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 CCR3P51677 355 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 NRLP54845 237 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 TWF1Q12792 350 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 DMP1Q13316 513 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 NBR1Q14596 966 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 SLC10A6Q3KNW5 377 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 CYP4A22Q5TCH4 519 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 MPZL3Q6UWV2 235 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 C1orf186Q6ZWK4 172 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 MFSD6LQ8IWD5 586 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 CELF5Q8N6W0 485 aaKnown RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 SHKBP1Q8TBC3 707 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 ZSCAN18Q8TBC5 510 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 FAM3CQ92520 227 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 DDX12PQ92771 950 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 ZBTB45Q96K62 511 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 LMAN1LQ9HAT1 526 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
LIMS2-210ENST00000413578 NUB1Q9Y5A7 615 aa13.3□□□□□ -0.28
LIMS2-210ENST00000413578 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 M0QZQ0 153 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 LRP3O75074 770 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 OAZ2O95190 189 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 RETP07949 1114 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 GJA1P17302 382 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 LRPAP1P30533 357 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-210ENST00000413578 NEK4P51957 841 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 SATB1Q01826 763 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 FCHO2Q0JRZ9 810 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 PTGDRQ13258 359 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 LAIR1Q6GTX8 287 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 RNF19BQ6ZMZ0 732 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 ELMOD1Q8N336 334 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 TMEM130Q8N3G9 435 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 APPL2Q8NEU8 664 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 SNX29Q8TEQ0 813 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 DRC1Q96MC2 740 aa13.29□□□□□ -0.28
LIMS2-210ENST00000413578 ZNF512Q96ME7 567 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms