RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 JAKMIP2Q96AA8 810 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 CCDC42Q96M95 316 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 ZMAT2Q96NC0 199 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 EIF3CQ99613 913 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TRAIPQ9BWF2 469 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 NIF3L1Q9GZT8 377 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 DEF6Q9H4E7 631 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 HAUS4Q9H6D7 363 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 RRAGDQ9NQL2 400 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TRMT1Q9NXH9 659 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 TUBGCP4Q9UGJ1 667 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 REXO2Q9Y3B8 237 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 NUB1Q9Y5A7 615 aa7.15□□□□□ -1.26
VPS41-204ENST00000413141 BZW2Q9Y6E2 419 aaKnown RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 EPN1Q9Y6I3 576 aaPredicted RBP7.15□□□□□ -1.26
VPS41-204ENST00000413141 SMIM28A0A1B0GU29 152 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 PTGESO14684 152 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ZNF263O14978 683 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 AKR1B10O60218 316 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 IPO7O95373 1038 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 STAU1O95793 577 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 KRT19P08727 400 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 CCDC172P0C7W6 258 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ITGA4P13612 1032 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ATF7P17544 494 aaPredicted RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 ACO1P21399 889 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 ATICP31939 592 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 MLH1P40692 756 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ZBTB6Q15916 424 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 SLC18A3Q16572 532 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 SGSM1Q2NKQ1 1148 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ZNF571Q7Z3V5 609 aaPredicted RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 MRPL10Q7Z7H8 261 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 REXO1L1PQ8IX06 675 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 BEST2Q8NFU1 509 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 LINC01599Q8WXQ3 324 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 C18orf25Q96B23 403 aaPredicted RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 TOX2Q96NM4 488 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 TSPAN18Q96SJ8 248 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ADAM2Q99965 735 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 SYT11Q9BT88 431 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 IFIH1Q9BYX4 1025 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 C11orf49Q9H6J7 331 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 VRTNQ9H8Y1 702 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 DPP3Q9NY33 737 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 KLK14Q9P0G3 267 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 NOCTQ9UK39 431 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 UBQLN1Q9UMX0 589 aaKnown RBP7.14□□□□□ -1.27
VPS41-204ENST00000413141 NENFQ9UMX5 172 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 DNAH12Q6ZR08 3092 aa7.14□□□□□ -1.27
VPS41-204ENST00000413141 ATP8B3O60423 1300 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 A0A087X0T9 212 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 A0A0U1RQF3 1178 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 A0A0U1RQJ8 604 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 GOLGA6L9A6NEM1 432 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 PPEF2O14830 753 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 XPOTO43592 962 aaKnown RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 NBNO60934 754 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 ZNF623O75123 536 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 FAM228BP0C875 321 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SKIP12755 728 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 KRT5P13647 590 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 CYP3A5P20815 502 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 CLCN1P35523 988 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 USP8P40818 1118 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 PDE6CP51160 858 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 VAV2P52735 878 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 ZNF132P52740 706 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 KRT83P78385 493 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 RBP5P82980 135 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 CYP27A1Q02318 531 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 TLE2Q04725 743 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 GFPT1Q06210 699 aaPredicted RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 SOX4Q06945 474 aaPredicted RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 GPNMBQ14956 572 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SPA17Q15506 151 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 PLEKHG4Q58EX7 1191 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 ZNF667Q5HYK9 610 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 C9orf57Q5W0N0 161 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SCARA5Q6ZMJ2 495 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 AGMOQ6ZNB7 445 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 NYAP1Q6ZVC0 841 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 NOP9Q86U38 636 aaKnown RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 ZNF598Q86UK7 904 aaKnown RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 SLC47A2Q86VL8 602 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 VPS36Q86VN1 386 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 LRRC52Q8N7C0 313 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 RBBP8NLQ8NC74 664 aaPredicted RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 LNX1Q8TBB1 728 aaPredicted RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 EPS8L1Q8TE68 723 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SLC20A1Q8WUM9 679 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 ATRIPQ8WXE1 791 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 SPOCK2Q92563 424 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms