RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ELMSAN1Q6PJG2 1045 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 RSPO2Q6UXX9 243 aaPredicted RBP20.45■□□□□ 0.86
TRIM56-202ENST00000412507 EPM2AIP1Q7L775 607 aaPredicted RBP20.45■□□□□ 0.86
TRIM56-202ENST00000412507 GPR149Q86SP6 731 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 KREMEN2Q8NCW0 462 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 BEST2Q8NFU1 509 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 ZNF507Q8TCN5 953 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 NOC3LQ8WTT2 800 aaKnown RBP20.45■□□□□ 0.86
TRIM56-202ENST00000412507 HDAC7Q8WUI4 952 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 PAGE5Q96GU1 130 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 SUSD3Q96L08 255 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 FAM213AQ9BRX8 229 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 PLEKHA4Q9H4M7 779 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.45■□□□□ 0.86
TRIM56-202ENST00000412507 CDY1Q9Y6F8 540 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 TRIOO75962 3097 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 CCDC195A0A1B0GUA6 201 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 PVALEFA0A1B0GWK0 134 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 GOLGA8IPA6NC78 632 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 GOLGA8JA6NMD2 632 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 PPEF2O14830 753 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 EIF3DO15371 548 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIM56-202ENST00000412507 RFPL2O75678 378 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 LDHAP00338 332 aaKnown RBP20.44■□□□□ 0.86
TRIM56-202ENST00000412507 SYKP43405 635 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 NDUFA8P51970 172 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 VARS2Q5ST30 1063 aaKnown RBP20.44■□□□□ 0.86
TRIM56-202ENST00000412507 ARMCX5Q6P1M9 558 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 RNF135Q8IUD6 432 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 FSIP1Q8NA03 581 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 USP25Q9UHP3 1055 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 DERAQ9Y315 318 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 BACE2Q9Y5Z0 518 aa20.44■□□□□ 0.86
TRIM56-202ENST00000412507 A0A1W2PQ27 194 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 A0A1W2PQ64 194 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 A0A1W2PQD8 194 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 TULP1O00294 542 aaPredicted RBP20.43■□□□□ 0.86
TRIM56-202ENST00000412507 SYN3O14994 580 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 KLRC4O43908 158 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 WNT7BP56706 349 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 POU5F1Q01860 360 aaKnown RBP20.43■□□□□ 0.86
TRIM56-202ENST00000412507 EFCAB13Q8IY85 973 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 CMASQ8NFW8 434 aaPredicted RBP20.43■□□□□ 0.86
TRIM56-202ENST00000412507 GOLPH3LQ9H4A5 285 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 SLC39A2Q9NP94 309 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 FBXW11Q9UKB1 542 aa20.43■□□□□ 0.86
TRIM56-202ENST00000412507 PI4K2BG5E9Z4 385 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 EXTL3O43909 919 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 IL18RAPO95256 599 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 RAB33AQ14088 237 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 C9orf57Q5W0N0 161 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 C15orf39Q6ZRI6 1047 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 BRSK2Q8IWQ3 736 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 NELFCDQ8IXH7 590 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 SCFD1Q8WVM8 642 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 PCDHB8Q9UN66 801 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 C2CD2Q9Y426 696 aa20.42■□□□□ 0.86
TRIM56-202ENST00000412507 H7C4K7 107 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 M0QZQ0 153 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 ZMYND10O75800 440 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 MRPL58Q14197 206 aaKnown RBP20.41■□□□□ 0.86
TRIM56-202ENST00000412507 GPD1LQ8N335 351 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 APPL2Q8NEU8 664 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 SMG7Q92540 1137 aaKnown RBP20.41■□□□□ 0.86
TRIM56-202ENST00000412507 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
TRIM56-202ENST00000412507 DPP3Q9NY33 737 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 RBAKQ9NYW8 714 aaPredicted RBP20.41■□□□□ 0.86
TRIM56-202ENST00000412507 MUTYHQ9UIF7 546 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 NR2E1Q9Y466 385 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 UBE4BO95155 1302 aa20.41■□□□□ 0.86
TRIM56-202ENST00000412507 C2CD4DB7Z1M9 353 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 PIRO00625 290 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 TGFB1I1O43294 461 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 DCXO43602 365 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 TBC1D4O60343 1298 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 AARSP49588 968 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRIM56-202ENST00000412507 LILRA4P59901 499 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 KMT5BQ4FZB7 885 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 CTXN3Q4LDR2 81 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 LIN9Q5TKA1 542 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 DSTYKQ6XUX3 929 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 PRKD2Q9BZL6 878 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 EXOC1Q9NV70 894 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 ZDHHC7Q9NXF8 308 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 HSPBP1Q9NZL4 362 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 FBXL5Q9UKA1 691 aa20.4■□□□□ 0.86
TRIM56-202ENST00000412507 TIMM13Q9Y5L4 95 aaPredicted RBP20.4■□□□□ 0.86
TRIM56-202ENST00000412507 ANO9A1A5B4 782 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 KIAA0391O15091 583 aaKnown RBP20.39■□□□□ 0.85
TRIM56-202ENST00000412507 CLIC2O15247 247 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 C8AP07357 584 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 PRR29P0C7W0 189 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 ALADP13716 330 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 ARPP19P56211 112 aa20.39■□□□□ 0.85
TRIM56-202ENST00000412507 TFAMQ00059 246 aaKnown RBP20.39■□□□□ 0.85
TRIM56-202ENST00000412507 ROR1Q01973 937 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms