RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 H0YGN5 161 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 TMEM189-UBE2V1I3L0A0 370 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 ASS1P00966 412 aaKnown RBP20.08■□□□□ 0.81
CDC42-204ENST00000411827 KRT19P08727 400 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 TRIM14Q14142 442 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 BTG3Q14201 252 aaPredicted RBP20.08■□□□□ 0.81
CDC42-204ENST00000411827 SV2CQ496J9 727 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 FIGNQ5HY92 759 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 LMBRD2Q68DH5 695 aaPredicted RBP20.08■□□□□ 0.81
CDC42-204ENST00000411827 C18orf25Q96B23 403 aaPredicted RBP20.08■□□□□ 0.81
CDC42-204ENST00000411827 NT5C1BQ96P26 610 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 COLEC11Q9BWP8 271 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 RC3H2Q9HBD1 1191 aaKnown RBP20.08■□□□□ 0.81
CDC42-204ENST00000411827 TUBGCP4Q9UGJ1 667 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 AGAP1Q9UPQ3 857 aa20.08■□□□□ 0.81
CDC42-204ENST00000411827 TRAPPC3O43617 180 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 LAG3P18627 525 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 TBXAS1P24557 533 aaPredicted RBP20.07■□□□□ 0.8
CDC42-204ENST00000411827 PON1P27169 355 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 PBX1P40424 430 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 ALDH7A1P49419 539 aaKnown RBP20.07■□□□□ 0.8
CDC42-204ENST00000411827 SYCP1Q15431 976 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 UPP1Q16831 310 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 SPECC1LQ69YQ0 1117 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 TRIM65Q6PJ69 517 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 COLGALT2Q8IYK4 626 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 NEK11Q8NG66 645 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 CXorf38Q8TB03 319 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 HPDLQ96IR7 371 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 PCMTD1Q96MG8 357 aaPredicted RBP20.07■□□□□ 0.8
CDC42-204ENST00000411827 DNAI2Q9GZS0 605 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 INTS2Q9H0H0 1204 aaKnown RBP20.07■□□□□ 0.8
CDC42-204ENST00000411827 CXXC1Q9P0U4 656 aaPredicted RBP20.07■□□□□ 0.8
CDC42-204ENST00000411827 SIX4Q9UIU6 781 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 PLAGL2Q9UPG8 496 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 SIK3Q9Y2K2 1263 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 RWDD3Q9Y3V2 267 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 COL4A6Q14031 1691 aa20.07■□□□□ 0.8
CDC42-204ENST00000411827 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 PODXLO00592 558 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 TEX33O43247 280 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 VNN1O95497 513 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 TPM1P09493 284 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 POLR2BP30876 1174 aaKnown RBP20.06■□□□□ 0.8
CDC42-204ENST00000411827 TAF6P49848 677 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 AFF1P51825 1210 aaKnown RBP20.06■□□□□ 0.8
CDC42-204ENST00000411827 YWHAEP62258 255 aaKnown RBP20.06■□□□□ 0.8
CDC42-204ENST00000411827 GCNT1Q02742 428 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 ELAVL2Q12926 359 aaKnown RBP20.06■□□□□ 0.8
CDC42-204ENST00000411827 ZNF699Q32M78 642 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 ZNF667Q5HYK9 610 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 DPH6Q7L8W6 267 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 LMO3Q8TAP4 145 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 SPATA18Q8TC71 538 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 XYLT2Q9H1B5 865 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 GDAP2Q9NXN4 497 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 APEX2Q9UBZ4 518 aa20.06■□□□□ 0.8
CDC42-204ENST00000411827 TLL1O43897 1013 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 ADCY5O95622 1261 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 CST3P01034 146 aaPredicted RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 PPM1AP35813 382 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 MYL6P60660 151 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 NOP14P78316 857 aaKnown RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 SOX4Q06945 474 aaPredicted RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 SHHQ15465 462 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 VSTM4Q8IW00 320 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 FIBCD1Q8N539 461 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 SP7Q8TDD2 431 aaPredicted RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 CRACR2AQ9BSW2 395 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 NUCKS1Q9H1E3 243 aaKnown RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 CXCL16Q9H2A7 254 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 NRDE2Q9H7Z3 1164 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 CYP3A43Q9HB55 503 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 MYO6Q9UM54 1294 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 FAN1Q9Y2M0 1017 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 PDCD11Q14690 1871 aaKnown RBP20.05■□□□□ 0.8
CDC42-204ENST00000411827 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
CDC42-204ENST00000411827 KPNA7A9QM74 516 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 B3GAT3O94766 335 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 DDHD2O94830 711 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 CLCNKBP51801 687 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 MFAP3P55082 362 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 LILRA4P59901 499 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 KCNMA1Q12791 1236 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 KLHDC7AQ5VTJ3 777 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 ZNF397Q8NF99 534 aaPredicted RBP20.04■□□□□ 0.8
CDC42-204ENST00000411827 SEMA4DQ92854 862 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 ZNF558Q96NG5 402 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 NIF3L1Q9GZT8 377 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 IMPACTQ9P2X3 320 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 DSEQ9UL01 958 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 NUB1Q9Y5A7 615 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 PCDHA11Q9Y5I1 949 aa20.04■□□□□ 0.8
CDC42-204ENST00000411827 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.03■□□□□ 0.8
CDC42-204ENST00000411827 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.03■□□□□ 0.8
CDC42-204ENST00000411827 A0A1W2PQJ5 194 aa20.03■□□□□ 0.8
CDC42-204ENST00000411827 AARSP49588 968 aaKnown RBP eCLIP20.03■□□□□ 0.8
CDC42-204ENST00000411827 TNNC1P63316 161 aa20.03■□□□□ 0.8
CDC42-204ENST00000411827 WDR72Q3MJ13 1102 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms