RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ERP27Q96DN0 273 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 RIOK1Q9BRS2 568 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 RMI1Q9H9A7 625 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 C17orf75Q9HAS0 396 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 NKIRAS1Q9NYS0 192 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ADAMTS1Q9UHI8 967 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 COL4A3BPQ9Y5P4 624 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 A0A0J9YVX5 310 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC162PA2VCL2 907 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC85CA6NKD9 419 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 DDX3YO15523 660 aaKnown RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 FKTNO75072 461 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 ENTPD5O75356 428 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 H2AFZP0C0S5 128 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CETPP11597 493 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 SCG2P13521 617 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CTNNA2P26232 953 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 MCM7P33993 719 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 RTP1P59025 263 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 TAF1CQ15572 869 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 H2AFVQ71UI9 128 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 VPS36Q86VN1 386 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 BTBD10Q9BSF8 475 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 LOC285556D6RIA3 1793 aa11.29□□□□□ -0.6
NIF3L1-204ENST00000409357 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 M0R2N6 131 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 MAGEC1O60732 1142 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 DNAJC6O75061 913 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 FGGP02679 453 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 EPHB2P29323 1055 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 PLTPP55058 493 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 ASIC1P78348 528 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 CDR2Q01850 454 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 CAV1Q03135 178 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 TROAPQ12815 778 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 KRT72Q14CN4 511 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 RCN1Q15293 331 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 PIK3AP1Q6ZUJ8 805 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 HS2ST1Q7LGA3 356 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 SPATA24Q86W54 205 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 C10orf82Q8WW14 230 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 YIPF2Q9BWQ6 316 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 SPATA7Q9P0W8 599 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 WHRNQ9P202 907 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 KIAA0100Q14667 2235 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-204ENST00000409357 CAPN9O14815 690 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PRPF4O43172 522 aaKnown RBP eCLIP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 TBC1D12O60347 775 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 EDF1O60869 148 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 TBX10O75333 385 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 GAS8O95995 478 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 BRAFP15056 766 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PLCG2P16885 1265 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 POLR2FP61218 127 aaKnown RBP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 RASA2Q15283 850 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 CTC1Q2NKJ3 1217 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 BORAQ6PGQ7 559 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 NCCRP1Q6ZVX7 275 aaPredicted RBP11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 PHLDB2Q86SQ0 1253 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 CABP7Q86V35 215 aa11.27□□□□□ -0.6
NIF3L1-204ENST00000409357 BLIDQ8IZY5 108 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms