RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 CDKAL1Q5VV42 579 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 SLC35C1Q96A29 364 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 IGSF21Q96ID5 467 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 COLEC11Q9BWP8 271 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 ITGA11Q9UKX5 1188 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 AGAP1Q9UPQ3 857 aa16.34■□□□□ 0.21
SNRNP27-202ENST00000409116 KCNJ18B7U540 433 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 I3L4J1 428 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 RFXAPO00287 272 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 PHACTR2O75167 634 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 TADA2AO75478 443 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 CSPG5O95196 566 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 C4BPAP04003 597 aaKnown RBP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 MCCD1P59942 119 aaPredicted RBP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 KCNJ12Q14500 433 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 ZACNQ401N2 412 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 POTEHQ6S545 545 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 SV2AQ7L0J3 742 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 LUZP1Q86V48 1076 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 FAM114A1Q8IWE2 563 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 GDPD5Q8WTR4 605 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 TMEM169Q96HH4 297 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 C11orf84Q9BUA3 381 aaPredicted RBP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 PLVAPQ9BX97 442 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 VN1R3Q9BXE9 311 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 HSD3B7Q9H2F3 369 aa16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 ALG13Q9NP73 1137 aaKnown RBP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.33■□□□□ 0.2
SNRNP27-202ENST00000409116 BECN2A8MW95 431 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 TMEM189-UBE2V1I3L0A0 370 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 PIRO00625 290 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 SPTLC1O15269 473 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 VNN1O95497 513 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 CST3P01034 146 aaPredicted RBP16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 RB1P06400 928 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 BRCC3P46736 316 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 MXI1P50539 228 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 AP3M2P53677 418 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 RBP5P82980 135 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 GPM6BQ13491 265 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 NCOA4Q13772 614 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 TCP11X2Q5H9J9 407 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 FAM161BQ96MY7 647 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 TMEM8AQ9HCN3 771 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 NUB1Q9Y5A7 615 aa16.32■□□□□ 0.2
SNRNP27-202ENST00000409116 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 TMEM265A0A087WTH1 108 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 CARNS1A5YM72 827 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 GRM6O15303 877 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 STX10O60499 249 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 HLA-DRAP01903 254 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 DNAJB1P25685 340 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 GTF2H1P32780 548 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 LILRA4P59901 499 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 TRPC3Q13507 836 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 ZNF697Q5TEC3 545 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 FUT10Q6P4F1 479 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 TAS1R1Q7RTX1 841 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 SPPL3Q8TCT6 385 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 TAS1R2Q8TE23 839 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 B3GALT6Q96L58 329 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 PLXNA4Q9HCM2 1894 aa16.31■□□□□ 0.2
SNRNP27-202ENST00000409116 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.27e-6■■■■■ 28.7
SNRNP27-202ENST00000409116 H3BNC9 293 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 CAVIN2O95810 425 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 AFPP02771 609 aaKnown RBP16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 ATP1A3P13637 1013 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 ZNF18P17022 549 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 FMO5P49326 533 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 MYL6P60660 151 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 MYL7Q01449 175 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 KRT17Q04695 432 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 GRIN2CQ14957 1233 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 KRT31Q15323 416 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 TIGD5Q53EQ6 642 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 Q7L0L9 218 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 ZNF560Q96MR9 790 aa16.3■□□□□ 0.2
SNRNP27-202ENST00000409116 TUBGCP2Q9BSJ2 902 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms