RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 KIF2CQ99661 725 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 CXCL16Q9H2A7 254 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 C8orf33Q9H7E9 229 aaPredicted RBP13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 NUB1Q9Y5A7 615 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 CHD6Q8TD26 2715 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 MAP1BP46821 2468 aaKnown RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 SHISA7A6NL88 538 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 I3L4J1 428 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 PODXLO00592 558 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 MED24O75448 989 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 MARCKSP29966 332 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 GRM5P41594 1212 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 LPAL2Q16609 132 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 ME3Q16798 604 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 VITQ6UXI7 678 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 GOLGA2P5Q9HBQ8 144 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 ASAH2Q9NR71 780 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 SEMA4GQ9NTN9 838 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 AFF4Q9UHB7 1163 aaKnown RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.46□□□□□ -0.25
APOBEC3B-204ENST00000407298 COL4A3Q01955 1670 aa13.46□□□□□ -0.26
APOBEC3B-204ENST00000407298 PAPSS2O95340 614 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 CHRNB1P11230 501 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 KCNE1P15382 129 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 CCNE1P24864 410 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 MCM7P33993 719 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 PLD1Q13393 1074 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 ORC2Q13416 577 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 MRPL58Q14197 206 aaKnown RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 ALKAL1Q6UXT8 129 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 PRR23CQ6ZRP0 262 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 DIS3L2Q8IYB7 885 aaKnown RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 C3orf58Q8NDZ4 430 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 ZSCAN18Q8TBC5 510 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 FAM200AQ8TCP9 573 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 ACAP3Q96P50 834 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 MRPL4Q9BYD3 311 aaKnown RBP13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 SLITRK6Q9H5Y7 841 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 STK24Q9Y6E0 443 aa13.45□□□□□ -0.26
APOBEC3B-204ENST00000407298 CHADO15335 359 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 SEC24AO95486 1093 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 MYL4P12829 197 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 CCR2P41597 374 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 NEK4P51957 841 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 KPNA1P52294 538 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 EPHA5P54756 1037 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 SATB1Q01826 763 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 TWF1Q12792 350 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 PTGDRQ13258 359 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 DGKKQ5KSL6 1271 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 IL31Q6EBC2 164 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 CEP68Q76N32 757 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 SUSD3Q96L08 255 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 ZSWIM3Q96MP5 696 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 TCHPQ9BT92 498 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 TMEM134Q9H6X4 195 aa13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 RBM19Q9Y4C8 960 aaKnown RBP13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.44□□□□□ -0.26
APOBEC3B-204ENST00000407298 CNOT1A5YKK6 2376 aaKnown RBP13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 HRO43593 1189 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 FGF19O95750 216 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 EDN1P05305 212 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 MCF2P10911 925 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 CPB1P15086 417 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 HOXA6P31267 233 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 MCM4P33991 863 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 VIPR2P41587 438 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 FNTBP49356 437 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 OSTNP61366 133 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 HAUS6Q7Z4H7 955 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 SYNPOQ8N3V7 929 aa13.43□□□□□ -0.26
APOBEC3B-204ENST00000407298 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms