RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LRRC10BA6NIK2 292 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 PODXLO00592 558 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
HMGA1-204ENST00000401473 B3GAT3O94766 335 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 KIF4AO95239 1232 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 RPL9P32969 192 aaKnown RBP17.21■□□□□ 0.35
HMGA1-204ENST00000401473 MIIPQ5JXC2 388 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 APTXQ7Z2E3 356 aaKnown RBP17.21■□□□□ 0.35
HMGA1-204ENST00000401473 USP37Q86T82 979 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 HASPINQ8TF76 798 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 TUBGCP2Q9BSJ2 902 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 MARCH5Q9NX47 278 aa17.21■□□□□ 0.35
HMGA1-204ENST00000401473 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
HMGA1-204ENST00000401473 EPOPA6NHQ4 379 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 EEF1GP26641 437 aaKnown RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 POLR2BP30876 1174 aaKnown RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 MTIF2P46199 727 aaKnown RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 ERVK-21P61565 698 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 EPC2Q52LR7 807 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 SLC39A11Q8N1S5 342 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 ZNF558Q96NG5 402 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 SPTLC1O15269 473 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 TNNC2P02585 160 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 KRT19P08727 400 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 LAG3P18627 525 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 GTF2H1P32780 548 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 AP3M2P53677 418 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 KRT31Q15323 416 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 Q7L0L9 218 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 KLHL23Q8NBE8 558 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 TAS1R2Q8TE23 839 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 DDX27Q96GQ7 796 aaKnown RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 IGSF21Q96ID5 467 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 UROC1Q96N76 676 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 TMEM8AQ9HCN3 771 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
HMGA1-204ENST00000401473 ITGA11Q9UKX5 1188 aa17.2■□□□□ 0.34
HMGA1-204ENST00000401473 FMO5P49326 533 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 LILRA4P59901 499 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 BIRC3Q13489 604 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 KRT39Q6A163 491 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 SEMA4DQ92854 862 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 VN1R3Q9BXE9 311 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 RBSNQ9H1K0 784 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 PCDHB12Q9Y5F1 795 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 PLXNA4Q9HCM2 1894 aa17.19■□□□□ 0.34
HMGA1-204ENST00000401473 C5orf67F2Z3F1 127 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 RFXAPO00287 272 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 EFEMP2O95967 443 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
HMGA1-204ENST00000401473 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
HMGA1-204ENST00000401473 CTNNB1P35222 781 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 MYL6P60660 151 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 GRIN2CQ14957 1233 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 ARNTL2Q8WYA1 636 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 XYLT2Q9H1B5 865 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 VPS16Q9H269 839 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 NDST4Q9H3R1 872 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 ALG13Q9NP73 1137 aaKnown RBP17.18■□□□□ 0.34
HMGA1-204ENST00000401473 AAASQ9NRG9 546 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 TAB2Q9NYJ8 693 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 SPG21Q9NZD8 308 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 LIMA1Q9UHB6 759 aaKnown RBP17.18■□□□□ 0.34
HMGA1-204ENST00000401473 ADAM28Q9UKQ2 775 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 VWA8A3KMH1 1905 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 TMEM189-UBE2V1I3L0A0 370 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 I3L4J1 428 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 FGF18O76093 207 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 AFPP02771 609 aaKnown RBP17.18■□□□□ 0.34
HMGA1-204ENST00000401473 BRCC3P46736 316 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 MXI1P50539 228 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 RBP5P82980 135 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 NCOA4Q13772 614 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 MAN2A1Q16706 1144 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 VWA3BQ502W6 1294 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 PI4K2AQ9BTU6 479 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 COLEC11Q9BWP8 271 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■■ 47.4
HMGA1-204ENST00000401473 COQ4Q9Y3A0 265 aa17.18■□□□□ 0.34
HMGA1-204ENST00000401473 PHACTR2O75167 634 aa17.17■□□□□ 0.34
HMGA1-204ENST00000401473 TADA2AO75478 443 aa17.17■□□□□ 0.34
HMGA1-204ENST00000401473 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
HMGA1-204ENST00000401473 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
HMGA1-204ENST00000401473 PLVAPQ9BX97 442 aa17.17■□□□□ 0.34
HMGA1-204ENST00000401473 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
HMGA1-204ENST00000401473 PMM2O15305 246 aa17.16■□□□□ 0.34
HMGA1-204ENST00000401473 STX10O60499 249 aa17.16■□□□□ 0.34
HMGA1-204ENST00000401473 DNAJB1P25685 340 aa17.16■□□□□ 0.34
HMGA1-204ENST00000401473 AARSP49588 968 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGA1-204ENST00000401473 PLCB3Q01970 1234 aa17.16■□□□□ 0.34
HMGA1-204ENST00000401473 GPR153Q6NV75 609 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms