RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 TMEM134Q9H6X4 195 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 BRD9Q9H8M2 597 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 SLC38A7Q9NVC3 462 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 CEP72Q9P209 647 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 NUB1Q9Y5A7 615 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 LAMA1P25391 3075 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 F5P12259 2224 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SYN3O14994 580 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SLC16A4O15374 487 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 MCF2P10911 925 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 TDGF1P13385 188 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 GDI1P31150 447 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 MCM4P33991 863 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 VIPR2P41587 438 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SPAG1Q07617 926 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 RAD51AP2Q09MP3 1159 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 TWF1Q12792 350 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 PTGDRQ13258 359 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 DMP1Q13316 513 aaPredicted RBP13.04□□□□□ -0.32
LINC00544-201ENST00000400540 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
LINC00544-201ENST00000400540 IL17AQ16552 155 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 DDX12PQ92771 950 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 NELL2Q99435 816 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 MMTAG2Q9BU76 263 aaKnown RBP13.04□□□□□ -0.32
LINC00544-201ENST00000400540 ZFP14Q9HCL3 533 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 ANKFY1Q9P2R3 1169 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
LINC00544-201ENST00000400540 SCN1AP35498 2009 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 H7C4K7 107 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 NCAM2O15394 837 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 VNN2O95498 520 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 OR4Q2P0C623 313 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 MYL4P12829 197 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 LPAL2Q16609 132 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 SLC10A6Q3KNW5 377 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 MAP4K3Q8IVH8 894 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 DRC1Q96MC2 740 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 TRMT61BQ9BVS5 477 aaKnown RBP13.03□□□□□ -0.32
LINC00544-201ENST00000400540 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF334Q9HCZ1 680 aaPredicted RBP13.03□□□□□ -0.32
LINC00544-201ENST00000400540 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
LINC00544-201ENST00000400540 LIMCH1Q9UPQ0 1083 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 MRPS17Q9Y2R5 130 aaKnown RBP13.03□□□□□ -0.32
LINC00544-201ENST00000400540 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
LINC00544-201ENST00000400540 SPTBN2O15020 2390 aa13.02□□□□□ -0.32
LINC00544-201ENST00000400540 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.32
LINC00544-201ENST00000400540 GREB1Q4ZG55 1949 aa13.02□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF197O14709 1029 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 MICAL2O94851 1124 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 CXCL8P10145 99 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 CPB1P15086 417 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 PSMC3P17980 439 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 TGM1P22735 817 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 ATXN1P54253 815 aaKnown RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 PDIA5Q14554 519 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 TEAD2Q15562 447 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 CYP4A22Q5TCH4 519 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 TPGS2Q68CL5 300 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 SHKBP1Q8TBC3 707 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 ZSCAN18Q8TBC5 510 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 FAM3CQ92520 227 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 IRF7Q92985 503 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 PGLYRP2Q96PD5 576 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 HAPLN2Q9GZV7 340 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
LINC00544-201ENST00000400540 USP18Q9UMW8 372 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 PCDHB8Q9UN66 801 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
LINC00544-201ENST00000400540 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms