RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 C1QTNF9BB2RNN3 333 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 ACKR2O00590 384 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 C1QTNF9P0C862 333 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 HOXC13P31276 330 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 HSPA4P34932 840 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 FCHO2Q0JRZ9 810 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 MRPL58Q14197 206 aaKnown RBP19.86■□□□□ 0.77
UFD1-202ENST00000399523 MAPK6Q16659 721 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 EEF1DP3Q658K8 133 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 TXNDC11Q6PKC3 985 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 GAB3Q8WWW8 586 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 RSPRY1Q96DX4 576 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 ZNF512Q96ME7 567 aaPredicted RBP19.86■□□□□ 0.77
UFD1-202ENST00000399523 GPR88Q9GZN0 384 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 GOLGA2P5Q9HBQ8 144 aa19.86■□□□□ 0.77
UFD1-202ENST00000399523 SLC38A8A6NNN8 435 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 SPECC1L-ADORA2AF8WAN1 911 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 CPLX1O14810 134 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 USO1O60763 962 aaKnown RBP19.85■□□□□ 0.77
UFD1-202ENST00000399523 GJA1P17302 382 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 CTHP32929 405 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 SOX9P48436 509 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 KPNA1P52294 538 aaPredicted RBP19.85■□□□□ 0.77
UFD1-202ENST00000399523 ARPP19P56211 112 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 TMEM132AQ24JP5 1023 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 DCAF4L1Q3SXM0 396 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 PIK3AP1Q6ZUJ8 805 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 CACNA2D4Q7Z3S7 1137 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 RALGPS2Q86X27 583 aaPredicted RBP19.85■□□□□ 0.77
UFD1-202ENST00000399523 SYNPOQ8N3V7 929 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 MCPH1Q8NEM0 835 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 CCDC113Q9H0I3 377 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 FBXL5Q9UKA1 691 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 MAFFQ9ULX9 164 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 PCDHA12Q9UN75 941 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 USP20Q9Y2K6 914 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 PCDHGA5Q9Y5G8 931 aa19.85■□□□□ 0.77
UFD1-202ENST00000399523 CCDC163A0A0D9SF12 145 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 H7C4K7 107 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 SYN3O14994 580 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 EDN1P05305 212 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 PRKCBP05771 671 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 MYL4P12829 197 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 CCINQ13939 588 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 TEAD2Q15562 447 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 MAEAQ7L5Y9 396 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 YAF2Q8IY57 180 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 ASAH2Q9NR71 780 aa19.84■□□□□ 0.77
UFD1-202ENST00000399523 DSPP15924 2871 aaKnown RBP19.84■□□□□ 0.77
UFD1-202ENST00000399523 A0A087WWV3 80 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 SMIM28A0A1B0GU29 152 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 RPP40O75818 363 aaKnown RBP19.83■□□□□ 0.77
UFD1-202ENST00000399523 PSMA5P28066 241 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 SOX4Q06945 474 aaPredicted RBP19.83■□□□□ 0.77
UFD1-202ENST00000399523 TWF1Q12792 350 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 TOB2Q14106 344 aaPredicted RBP19.83■□□□□ 0.77
UFD1-202ENST00000399523 PSAPL1Q6NUJ1 521 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 KBTBD6Q86V97 674 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 SHKBP1Q8TBC3 707 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 OXER1Q8TDS5 423 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 BSNDQ8WZ55 320 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 AFF4Q9UHB7 1163 aaKnown RBP19.83■□□□□ 0.77
UFD1-202ENST00000399523 WASF3Q9UPY6 502 aa19.83■□□□□ 0.77
UFD1-202ENST00000399523 DMXL2Q8TDJ6 3036 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 XKR4Q5GH76 650 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 EARS2Q5JPH6 523 aaKnown RBP19.82■□□□□ 0.76
UFD1-202ENST00000399523 ALKAL1Q6UXT8 129 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 ZNF274Q96GC6 653 aaPredicted RBP19.82■□□□□ 0.76
UFD1-202ENST00000399523 ZC3H10Q96K80 434 aaKnown RBP19.82■□□□□ 0.76
UFD1-202ENST00000399523 TMEM121BQ9BXQ6 578 aaPredicted RBP19.82■□□□□ 0.76
UFD1-202ENST00000399523 SLITRK6Q9H5Y7 841 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 VPS45Q9NRW7 570 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 AKAP13Q12802 2813 aa19.82■□□□□ 0.76
UFD1-202ENST00000399523 EML5Q05BV3 1969 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 EXTL3O43909 919 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 AKAP3O75969 853 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 ATP2B1P20020 1258 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 MPLP40238 635 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 PON2Q15165 354 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 CTXN3Q4LDR2 81 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 RNF43Q68DV7 783 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 CPLX2Q6PUV4 134 aaKnown RBP19.81■□□□□ 0.76
UFD1-202ENST00000399523 LRRC3Q9BY71 257 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 SMOC1Q9H4F8 434 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 TTC12Q9H892 705 aaPredicted RBP19.81■□□□□ 0.76
UFD1-202ENST00000399523 WDFY3Q8IZQ1 3526 aa19.81■□□□□ 0.76
UFD1-202ENST00000399523 ATG2BQ96BY7 2078 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 TMEM8BA6NDV4 472 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 PODXLO00592 558 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 CDC45O75419 566 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 NAMPTP43490 491 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 NT5DC1Q5TFE4 455 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 FAM200AQ8TCP9 573 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 LRRC3BQ96PB8 259 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 SLC38A7Q9NVC3 462 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 GTSE1Q9NYZ3 720 aa19.8■□□□□ 0.76
UFD1-202ENST00000399523 SPATA31C1P0DKV0 1188 aa19.79■□□□□ 0.76
UFD1-202ENST00000399523 LIG1P18858 919 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms