RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KRT13P13646 458 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 IGFBP4P22692 258 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 PMS1P54277 932 aaKnown RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 ERVFC1P60507 584 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 TFAMQ00059 246 aaKnown RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 DSG1Q02413 1049 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 TMC7Q7Z402 723 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 MRPL43Q8N983 215 aaKnown RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 C1orf127Q8N9H9 656 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 CXorf38Q8TB03 319 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 BORCS6Q96GS4 357 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 ZNF560Q96MR9 790 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 DUSP9Q99956 384 aaKnown RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 TCF25Q9BQ70 676 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 GPR62Q9BZJ7 368 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 METTL14Q9HCE5 456 aaKnown RBP19.09■□□□□ 0.65
CTNS-203ENST00000399306 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.09■□□□□ 0.65
CTNS-203ENST00000399306 TMEM63CQ9P1W3 806 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 NUB1Q9Y5A7 615 aa19.09■□□□□ 0.65
CTNS-203ENST00000399306 M0QZQ0 153 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 LILRB3O75022 631 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 URODP06132 367 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 TNNI1P19237 187 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 FGFR3P22607 806 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 GTF2H1P32780 548 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 GLUD2P49448 558 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 VAMP7P51809 220 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 RBP5P82980 135 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 BFSP1Q12934 665 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 KIAA0319Q5VV43 1072 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 KLHL10Q6JEL2 608 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 SASS6Q6UVJ0 657 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 FRMD5Q7Z6J6 570 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 C3orf58Q8NDZ4 430 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 PIK3R5Q8WYR1 880 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 OXCT2Q9BYC2 517 aaPredicted RBP19.08■□□□□ 0.64
CTNS-203ENST00000399306 ENTPD7Q9NQZ7 604 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 MRPL17Q9NRX2 175 aaKnown RBP19.08■□□□□ 0.64
CTNS-203ENST00000399306 FNIP2Q9P278 1114 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 CTNND2Q9UQB3 1225 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 VWA8A3KMH1 1905 aa19.08■□□□□ 0.64
CTNS-203ENST00000399306 TRIM49BA6NDI0 452 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 F8W810 466 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 STX10O60499 249 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 STAU1O95793 577 aaKnown RBP19.07■□□□□ 0.64
CTNS-203ENST00000399306 DLATP10515 647 aaKnown RBP19.07■□□□□ 0.64
CTNS-203ENST00000399306 TAF6P49848 677 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 MARSP56192 900 aaKnown RBP19.07■□□□□ 0.64
CTNS-203ENST00000399306 LILRA4P59901 499 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 COL19A1Q14993 1142 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 SV2CQ496J9 727 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 TRAPPC11Q7Z392 1133 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 CSGALNACT2Q8N6G5 542 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 CCDC127Q96BQ5 260 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 TTPALQ9BTX7 342 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 MTMR12Q9C0I1 747 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 RXFP1Q9HBX9 757 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 ANO10Q9NW15 660 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 CACNG4Q9UBN1 327 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 PCDHB8Q9UN66 801 aa19.07■□□□□ 0.64
CTNS-203ENST00000399306 R3HCC1Q9Y3T6 440 aaKnown RBP19.07■□□□□ 0.64
CTNS-203ENST00000399306 PTPRJQ12913 1337 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 C2orf71A6NGG8 1288 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 LRRIQ3A6PVS8 624 aaPredicted RBP19.06■□□□□ 0.64
CTNS-203ENST00000399306 CXCL14O95715 111 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 TYMPP19971 482 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 IRS1P35568 1242 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 PTPN14Q15678 1187 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 DPCR1Q3MIW9 517 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 FAM171A1Q5VUB5 890 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 KIAA1841Q6NSI8 718 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 CAVIN1Q6NZI2 390 aaKnown RBP19.06■□□□□ 0.64
CTNS-203ENST00000399306 APPL2Q8NEU8 664 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 SPATA18Q8TC71 538 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 PLEKHO2Q8TD55 490 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 MICAL1Q8TDZ2 1067 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 RABGGTAQ92696 567 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 EMILIN2Q9BXX0 1053 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 SIX4Q9UIU6 781 aa19.06■□□□□ 0.64
CTNS-203ENST00000399306 C4BPAP04003 597 aaKnown RBP19.05■□□□□ 0.64
CTNS-203ENST00000399306 ITGB3P05106 788 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 CYP11A1P05108 521 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 PRKCSHP14314 528 aaPredicted RBP19.05■□□□□ 0.64
CTNS-203ENST00000399306 ATICP31939 592 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 GUCY2FP51841 1108 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 MRPL58Q14197 206 aaKnown RBP19.05■□□□□ 0.64
CTNS-203ENST00000399306 STX1AQ16623 288 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 ZACNQ401N2 412 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 PLPP4Q5VZY2 271 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 ANKS3Q6ZW76 656 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 PPFIBP1Q86W92 1011 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 VRTNQ9H8Y1 702 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 GDAP2Q9NXN4 497 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 ARMCX3Q9UH62 379 aaPredicted RBP19.05■□□□□ 0.64
CTNS-203ENST00000399306 DSEQ9UL01 958 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 AGAP1Q9UPQ3 857 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 BACE2Q9Y5Z0 518 aa19.05■□□□□ 0.64
CTNS-203ENST00000399306 PMM2O15305 246 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms