RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 IGSF9BQ9UPX0 1349 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 USP27XA6NNY8 438 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TCP11X1B4DZS4 312 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 DFFAO00273 331 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZC3H11AO75152 810 aaKnown RBP eCLIP8.78□□□□□ -1
SPTLC3-201ENST00000399002 SLC25A27O95847 323 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 PDAP1Q13442 181 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 KDM7AQ6ZMT4 941 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 NLRP9Q7RTR0 991 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 SRLQ86TD4 932 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ASIC4Q96FT7 647 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 FAM84BQ96KN1 310 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 LRRC1Q9BTT6 524 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 RPAP3Q9H6T3 665 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 ARHGEF38Q9NXL2 777 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 SMARCAL1Q9NZC9 954 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 HDAC6Q9UBN7 1215 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 NEU2Q9Y3R4 380 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 A0A0A6YYK5 440 aaPredicted RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 PI4K2BG5E9Z4 385 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 EEF2KO00418 725 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 FGFR4P22455 802 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 NME3Q13232 169 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 GSPT2Q8IYD1 628 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CHST13Q8NET6 341 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 TEKT4Q8WW24 435 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ABCF3Q9NUQ8 709 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 SELENONQ9NZV5 590 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 LSM7Q9UK45 103 aaKnown RBP8.78□□□□□ -1
SPTLC3-201ENST00000399002 GRID1Q9ULK0 1009 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 ZDHHC9Q9Y397 364 aa8.78□□□□□ -1
SPTLC3-201ENST00000399002 CYP26A1O43174 497 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 UCHL3P15374 230 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 HMOX2P30519 316 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 PCYT1AP49585 367 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 MAP3K7CLP57077 242 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 EFHC1Q5JVL4 640 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 TAS2R42Q7RTR8 314 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 USP38Q8NB14 1042 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 CCDC126Q96EE4 140 aa8.77□□□□□ -1
SPTLC3-201ENST00000399002 CD163L1Q9NR16 1453 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 FLT1P17948 1338 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 TOMM70O94826 608 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 CSF1RP07333 972 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 SNRPAP09012 282 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNA2P16389 499 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 GPD1P21695 349 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 MAP4P27816 1152 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 PLA2G4AP47712 749 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 Q3C1V9 767 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 CCDC92Q53HC0 331 aaPredicted RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 SCN4BQ8IWT1 228 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM9CQ8IZT9 166 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 GANCQ8TET4 914 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 USP13Q92995 863 aaPredicted RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 GH1P01241 217 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 POLBP06746 335 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 ACTR2P61160 394 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 CNGA3Q16281 694 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 TRIM60Q495X7 471 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 DCP1BQ8IZD4 617 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 DTX3LQ8TDB6 740 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 SCFD2Q8WU76 684 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 SEC16BQ96JE7 1060 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 KRCC1Q9NPI7 259 aaPredicted RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 DYRK4Q9NR20 520 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 ZC3H7BQ9UGR2 993 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 PCSK1NQ9UHG2 260 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 DCTN4Q9UJW0 460 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 TTC7AQ9ULT0 858 aaPredicted RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 PCDHB2Q9Y5E7 798 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 O00370 1275 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 NMT2O60551 498 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 MMP10P09238 476 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 STAT5BP51692 787 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 VSNL1P62760 191 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 KCNA1Q09470 495 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 MRPL28Q13084 256 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 SYTL3Q4VX76 610 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 ZC3H12BQ5HYM0 836 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 WLSQ5T9L3 541 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 EEPD1Q7L9B9 569 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 RBBP8Q99708 897 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
SPTLC3-201ENST00000399002 CES2O00748 559 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 HIST1H2AGP0C0S8 130 aaPredicted RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 HIST1H2ADP20671 130 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 WASHC5Q12768 1159 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 KRR1Q13601 381 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 EMC2Q15006 297 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 SNRNP35Q16560 246 aaKnown RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 RBBP8NLQ8NC74 664 aaPredicted RBP8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 GPRASP2Q96D09 838 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 HIST1H2AHQ96KK5 128 aa8.76□□□□□ -1.01
SPTLC3-201ENST00000399002 RBM15Q96T37 977 aaKnown RBP eCLIP8.76□□□□□ -1.012e-7■■■■■ 39.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms