RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 APOBEC3GQ9HC16 384 aaKnown RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 MAPK13O15264 365 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 BANF1O75531 89 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 FDX1P10109 184 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 P3H1Q32P28 736 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 PREPLQ4J6C6 727 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 ZNF394Q53GI3 561 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 ATL2Q8NHH9 583 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 SERPINB12Q96P63 405 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 ROPN1BQ9BZX4 212 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 POLR3FQ9H1D9 316 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 ROPN1Q9HAT0 212 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 ADAM22Q9P0K1 906 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 PCDHA10Q9Y5I2 948 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 POC1B-GALNT4F8VUJ3 575 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 WNT10BO00744 389 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 PLA2G6O60733 806 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 GSCP56915 257 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 NCALDP61601 193 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-205ENST00000398978 OSBPL8Q9BZF1 889 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 HAPLN2Q9GZV7 340 aa20.76■□□□□ 0.91
COL13A1-205ENST00000398978 IGF2BP3O00425 579 aaKnown RBP eCLIP20.75■□□□□ 0.91
COL13A1-205ENST00000398978 LIG4P49917 911 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 CGB2Q6NT52 195 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 FITM2Q8N6M3 262 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 STAMBPL1Q96FJ0 436 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 TRAIPQ9BWF2 469 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 CXorf56Q9H5V9 222 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 RPAP3Q9H6T3 665 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-205ENST00000398978 COL4A5P29400 1685 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
COL13A1-205ENST00000398978 GIMAP7Q8NHV1 300 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 FBXL18Q96ME1 805 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 CCDC134Q9H6E4 229 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
COL13A1-205ENST00000398978 GOLGA8SH3BPF8 625 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 GOLGA8MH3BSY2 632 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 TLR3O15455 904 aaKnown RBP20.74■□□□□ 0.91
COL13A1-205ENST00000398978 FOXN2P32314 431 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 JAK3P52333 1124 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 WDR44Q5JSH3 913 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 TMEM63BQ5T3F8 832 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 TXNRD3NBQ6F5E7 133 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 NIPA1Q7RTP0 329 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 TMC2Q8TDI7 906 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 N4BP2L2Q92802 583 aaPredicted RBP20.74■□□□□ 0.91
COL13A1-205ENST00000398978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL13A1-205ENST00000398978 VNN1O95497 513 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 MGAT5Q09328 741 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 PRAMEF18Q5VWM3 479 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 MON1BQ7L1V2 547 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 RBM15Q96T37 977 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL13A1-205ENST00000398978 YY1AP1Q9H869 796 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 SAYSD1Q9NPB0 183 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 ANKEF1Q9NU02 776 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 DNPEPQ9ULA0 475 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 PCDHB2Q9Y5E7 798 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 LOXHD1Q8IVV2 1947 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 RASA4BC9J798 803 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 PMM2O15305 246 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 RASA4O43374 803 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 PROSCO94903 275 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 NR3C2P08235 984 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 GNA15P30679 374 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 ALDH5A1P51649 535 aaPredicted RBP20.74■□□□□ 0.91
COL13A1-205ENST00000398978 KRT76Q01546 638 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 MAMLD1Q13495 774 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 MIS18BP1Q6P0N0 1132 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 SPATA21Q7Z572 469 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 RNF146Q9NTX7 359 aa20.74■□□□□ 0.91
COL13A1-205ENST00000398978 PEX10O60683 326 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 PRKCEQ02156 737 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 KLF1Q13351 362 aaPredicted RBP20.73■□□□□ 0.91
COL13A1-205ENST00000398978 C4orf33Q8N1A6 199 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 ZNF526Q8TF50 670 aaPredicted RBP20.73■□□□□ 0.91
COL13A1-205ENST00000398978 CKAP2Q8WWK9 683 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 P3H4Q92791 437 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 MCM8Q9UJA3 840 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 OAS1P00973 400 aaKnown RBP20.73■□□□□ 0.91
COL13A1-205ENST00000398978 GCNT1Q02742 428 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 CROCCP2Q86T23 111 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 OR5B17Q8NGF7 314 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 DEFB129Q9H1M3 183 aa20.73■□□□□ 0.91
COL13A1-205ENST00000398978 SAE1Q9UBE0 346 aaPredicted RBP20.73■□□□□ 0.91
COL13A1-205ENST00000398978 WDR46O15213 610 aaKnown RBP20.72■□□□□ 0.91
COL13A1-205ENST00000398978 RGS20O76081 388 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 SUN1O94901 812 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 KRT16P08779 473 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 LRRIQ4A6NIV6 560 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 EDN1P05305 212 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 TMEM174Q8WUU8 243 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 SLCO2A1Q92959 643 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 KLHL29Q96CT2 875 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 FAM212AQ96EL1 285 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 SLCO1B3Q9NPD5 702 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 A1CFQ9NQ94 594 aaKnown RBP20.72■□□□□ 0.91
COL13A1-205ENST00000398978 ZNF148Q9UQR1 794 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 STBD1O95210 358 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms