RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MMEP08473 750 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 APOBEC3HQ6NTF7 200 aaKnown RBP15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 PROM2Q8N271 834 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 ZNF507Q8TCN5 953 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 USP33Q8TEY7 942 aa15.02□□□□□ -0.01
PCDHA11-201ENST00000398640 OCM2P0CE71 109 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 OCMP0CE72 109 aaPredicted RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TAF11Q15544 211 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 CAPNS2Q96L46 248 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TRPV6Q9H1D0 765 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TEKT2Q9UIF3 430 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 DIS3Q9Y2L1 958 aaKnown RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 KPNA7A9QM74 516 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 ALDH1A3P47895 512 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TMEM132DQ14C87 1099 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 WDR72Q3MJ13 1102 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 C15orf52Q6ZUT6 534 aaKnown RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 DEFB128Q7Z7B8 93 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 SLC26A7Q8TE54 656 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 PPP1R36Q96LQ0 422 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 ANGPTL2Q9UKU9 493 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 AKT1P31749 480 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 ALDH7A1P49419 539 aaKnown RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 BCAR1P56945 870 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 PDIA2Q13087 525 aaKnown RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 ZBED8Q8IZ13 594 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TTC39CQ8N584 583 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 MSCO60682 206 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 DIAPH2O60879 1101 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 AP3M2P53677 418 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 HAUS6Q7Z4H7 955 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 DDIASQ8IXT1 998 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 C1orf54Q8WWF1 131 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 SENP1Q9P0U3 644 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 HMGB1P1B2RPK0 211 aaPredicted RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 SPAG7O75391 227 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 PTPRAP18433 802 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 CDH6P55285 790 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 STOX1Q6ZVD7 989 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 TBC1D1Q86TI0 1168 aaPredicted RBP15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
PCDHA11-201ENST00000398640 ANKRD65E5RJM6 399 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 TPI1P60174 286 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 ZNF484Q5JVG2 852 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 RDM1Q8NG50 284 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 RIT2Q99578 217 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 EPC1Q9H2F5 836 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 KCNH7Q9NS40 1196 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 FGFR1OP2Q9NVK5 253 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 ZNF212Q9UDV6 495 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 CTIFO43310 598 aaKnown RBP15□□□□□ -0.01
PCDHA11-201ENST00000398640 PLA2G4FQ68DD2 849 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 DNERQ8NFT8 737 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 DCTN4Q9UJW0 460 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 DDHD2O94830 711 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 ARHGAP15Q53QZ3 475 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 FASTKD1Q53R41 847 aaKnown RBP15□□□□□ -0.01
PCDHA11-201ENST00000398640 STKLD1Q8NE28 680 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 TADA3O75528 432 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 CHGBP05060 677 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 SETSIPP0DME0 302 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 SNX17Q15036 470 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 DHX40Q8IX18 779 aaKnown RBP15□□□□□ -0.01
PCDHA11-201ENST00000398640 KIF17Q9P2E2 1029 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 FBXL5Q9UKA1 691 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 CCDC78A2IDD5 438 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 MIF4GDA9UHW6 222 aaKnown RBP15□□□□□ -0.01
PCDHA11-201ENST00000398640 HIBCHQ6NVY1 386 aaPredicted RBP15□□□□□ -0.01
PCDHA11-201ENST00000398640 NOTUMQ6P988 496 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 PID1Q7Z2X4 250 aa15□□□□□ -0.01
PCDHA11-201ENST00000398640 ESYT3A0FGR9 886 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 USP27XA6NNY8 438 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 KRT14P02533 472 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 SENP6Q9GZR1 1112 aaPredicted RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 NEUROG2Q9H2A3 272 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 CCDC188H7C350 402 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 CYP26A1O43174 497 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 NPTXRO95502 500 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 DGKZQ13574 1117 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 PMS2P54278 862 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 ACTR2P61160 394 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 COLEC11Q9BWP8 271 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 H0Y3Z8 333 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 GYG2O15488 501 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 OAZ1P54368 228 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 EXOSC10Q01780 885 aaKnown RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 MORF4L2Q15014 288 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 KLHL38Q2WGJ6 581 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 ITPRIPL1Q6GPH6 555 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 MRIQ9BWK5 157 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 PARP4Q9UKK3 1724 aaKnown RBP14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 PVALEFA0A1B0GWK0 134 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 VWA5AO00534 786 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 KRT7P08729 469 aa14.99□□□□□ -0.01
PCDHA11-201ENST00000398640 SH3BGRP55822 239 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms