RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CCNDBP1O95273 360 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CKBP12277 381 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 DCKP27707 260 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PPP2R1BP30154 601 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CUL4AQ13619 759 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MAPK11Q15759 364 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ANO5Q75V66 913 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CABP7Q86V35 215 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TRIM48Q8IWZ4 208 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 USP38Q8NB14 1042 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RP9Q8TA86 221 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 DEPDC1BQ8WUY9 529 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 STK33Q9BYT3 514 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 DIABLOQ9NR28 239 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AHSPQ9NZD4 102 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GHRLQ9UBU3 117 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SLC9A2Q9UBY0 812 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 KIAA1257Q9ULG3 409 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PCDHB4Q9Y5E5 795 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 H3BM21 787 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SGK1O00141 431 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RASSF9O75901 435 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MMP1P03956 469 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CYP2A6P11509 494 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 TNNI3P19429 210 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 LHX1P48742 406 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 VAMP7P51809 220 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 KRT72Q14CN4 511 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SF3B4Q15427 424 aaKnown RBP eCLIP2.86□□□□□ -1.953e-6■■■■□ 23.3
CHD9-202ENST00000398510 DUOXA2Q1HG44 320 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SPOPLQ6IQ16 392 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF280CQ8ND82 737 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NELFBQ8WX92 580 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CAMKK2Q96RR4 588 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FMO2Q99518 471 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD9-202ENST00000398510 FBXL21Q9UKT6 434 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FAM32AQ9Y421 112 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 H7C1W4 665 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AVILO75366 819 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FAM107AO95990 144 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ASGR1P07306 291 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HIST1H2AGP0C0S8 130 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 HARSP12081 509 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 HIST1H2ADP20671 130 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ATICP31939 592 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GPC3P51654 580 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PSMC5P62195 406 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MMRN1Q13201 1228 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NOGQ13253 232 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MUM1Q2TAK8 710 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ERO1BQ86YB8 467 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF366Q8N895 744 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 XXYLT1Q8NBI6 393 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 JARID2Q92833 1246 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 SPDL1Q96EA4 605 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HIST1H2AHQ96KK5 128 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TRERF1Q96PN7 1200 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HIST1H2AJQ99878 128 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 H2AFJQ9BTM1 129 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MSTO1Q9BUK6 570 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TMEM60Q9H2L4 133 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 WDR41Q9HAD4 459 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TRIM10Q9UDY6 481 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ANGPTL2Q9UKU9 493 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 EVPLLA8MZ36 301 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 H3BRJ5 948 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MYL3P08590 195 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CNTFP26441 200 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HSPA9P38646 679 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 MSH2P43246 934 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CAPZA2P47755 286 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CLK3P49761 638 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 CDH18Q13634 790 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AAGABQ6PD74 315 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 BEND7Q8N7W2 519 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 DHX58Q96C10 678 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HES6Q96HZ4 224 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PLA2G12BQ9BX93 195 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 WNT8AQ9H1J5 351 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 KCNK9Q9NPC2 374 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ADARB2Q9NS39 739 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 KCNH7Q9NS40 1196 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ADAM30Q9UKF2 790 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PARP14Q460N5 1801 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 C1orf167Q5SNV9 1468 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 OTOFQ9HC10 1997 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CCNB2O95067 398 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SDHBP21912 280 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PIK3R1P27986 724 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HTR7P34969 479 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TMED10P49755 219 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 BASP1P80723 227 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 SULT2A1Q06520 285 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PPIGQ13427 754 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD9-202ENST00000398510 C6orf10Q5SRN2 563 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF746Q6NUN9 644 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 TRPM8Q7Z2W7 1104 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TMEM199Q8N511 208 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 USHBP1Q8N6Y0 703 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms