RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CUL2Q13617 745 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 EEPD1Q7L9B9 569 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TLCD1Q96CP7 247 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PARP2Q9UGN5 583 aa19.55■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CYP1A1P04798 512 aaPredicted RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SLCO1A2P46721 670 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CENPCQ03188 943 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 KRT17Q04695 432 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TRIP13Q15645 432 aaPredicted RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HOOK3Q86VS8 718 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ART4Q93070 314 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HEMGNQ9BXL5 484 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NUB1Q9Y5A7 615 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GMNCA6NCL1 334 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TRAPPC3O43617 180 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GJB6O95452 261 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 UBA1P22314 1058 aaKnown RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GNA15P30679 374 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SARNPP82979 210 aaKnown RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 MON1BQ7L1V2 547 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 C12orf50Q8NA57 414 aaPredicted RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 RAPGEF5Q92565 580 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PCYT2Q99447 389 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FAM118BQ9BPY3 351 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PLVAPQ9BX97 442 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 AZI2Q9H6S1 392 aa19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 AVENQ9NQS1 362 aaPredicted RBP19.54■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SSC5DA1L4H1 1573 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 KIF3CO14782 793 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ENPEPQ07075 957 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CHADLQ6NUI6 762 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ZNF677Q86XU0 584 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 EPS8L3Q8TE67 593 aaKnown RBP19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ICAM3P32942 547 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ALDH5A1P51649 535 aaPredicted RBP19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 HIRAP54198 1017 aaPredicted RBP19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 BPIFB4P59827 614 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 IFI35P80217 286 aaPredicted RBP19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 QPCTQ16769 361 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 C11orf91Q3C1V1 193 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CCDC50Q8IVM0 306 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 FAM81BQ96LP2 452 aa19.53■□□□□ 0.72
CHRFAM7A-202ENST00000397827 PCNTO95613 3336 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 A0A0B4J269 797 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GSTTP1A0A1W2PQM5 241 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TP73O15350 636 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 RIPK2O43353 540 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GBP1P32455 592 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 GJC1P36383 396 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CALCOCO2Q13137 446 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CAPSQ13938 189 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 SLFN12LQ6IEE8 588 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DNERQ8NFT8 737 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 DDX27Q96GQ7 796 aaKnown RBP19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ADAM22Q9P0K1 906 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 BTBD7Q9P203 1132 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 ASIC3Q9UHC3 531 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 R3HDM2Q9Y2K5 976 aaKnown RBP19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 TNFSF9P41273 254 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 BYSLQ13895 437 aaKnown RBP19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 USTQ9Y2C2 406 aa19.52■□□□□ 0.72
CHRFAM7A-202ENST00000397827 CNTNAP2Q9UHC6 1331 aa19.52■□□□□ 0.71
CHRFAM7A-202ENST00000397827 POLR2AP24928 1970 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 THAP12O43422 761 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 FARP2O94887 1054 aaPredicted RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MYBL1P10243 752 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ABCD1P33897 745 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TAS2R40P59535 323 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NOMO3P69849 1222 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ZBTB33Q86T24 672 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ABRAQ8N0Z2 381 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RBBP8NLQ8NC74 664 aaPredicted RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RUNDC3BQ96NL0 473 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 DNAJC17Q9NVM6 304 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CHUKO15111 745 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RGS16O15492 202 aaPredicted RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PIGRP01833 764 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CLTAP09496 248 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RARGP13631 454 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 VPS41P49754 854 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CHST13Q8NET6 341 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SELENOSQ9BQE4 189 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NIFKQ9BYG3 293 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 R3HDMLQ9H3Y0 253 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 ADGRA2Q96PE1 1338 aa19.51■□□□□ 0.71
CHRFAM7A-202ENST00000397827 IGKV6D-21A0A0A0MT36 114 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MEFVO15553 781 aaPredicted RBP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 PROSCO94903 275 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 LDHAP00338 332 aaKnown RBP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 CST3P01034 146 aaPredicted RBP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 RALAP11233 206 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SLC1A1P43005 524 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SSR1P43307 286 aaKnown RBP19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 MAMLD1Q13495 774 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 NCOA4Q13772 614 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 SLMAPQ14BN4 828 aa19.5■□□□□ 0.71
CHRFAM7A-202ENST00000397827 TRIM11Q96F44 468 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms