RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZC3H3Q8IXZ2 948 aaKnown RBP5.34□□□□□ -1.56
SSR1-202ENST00000397511 EPS8L3Q8TE67 593 aaKnown RBP5.34□□□□□ -1.56
SSR1-202ENST00000397511 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 SEMA4DQ92854 862 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 SLC5A5Q92911 643 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 IFT43Q96FT9 208 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 DDX27Q96GQ7 796 aaKnown RBP5.34□□□□□ -1.56
SSR1-202ENST00000397511 TSPAN18Q96SJ8 248 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 CYP39A1Q9NYL5 469 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 SUCLA2Q9P2R7 463 aaPredicted RBP5.34□□□□□ -1.56
SSR1-202ENST00000397511 ZNF70Q9UC06 446 aaPredicted RBP5.34□□□□□ -1.56
SSR1-202ENST00000397511 WDR37Q9Y2I8 494 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 STXBP5LQ9Y2K9 1186 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 TMX2Q9Y320 296 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 ANKRD31Q8N7Z5 1873 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 SLX4Q8IY92 1834 aa5.34□□□□□ -1.56
SSR1-202ENST00000397511 SIPA1L1O43166 1804 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SPDYE2BA6NHP3 402 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 O00370 1275 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CLDN3O15551 220 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 GJB6O95452 261 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 VIL1P09327 827 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 SPDYE6P0CI01 402 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CCDC166P0CW27 439 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 BCRP11274 1271 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SKIP12755 728 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SKIV2L2P42285 1042 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 SERPINB4P48594 390 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 MXI1P50539 228 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PPP2R5CQ13362 524 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RASIP1Q5U651 963 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CAPN12Q6ZSI9 719 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ASRGL1Q7L266 308 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 JAMLQ86YT9 394 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TAB3Q8N5C8 712 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 RBBP8NLQ8NC74 664 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 OLIG1Q8TAK6 271 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ASAP3Q8TDY4 903 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CHURC1Q8WUH1 139 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 C17orf50Q8WW18 174 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ATXN2LQ8WWM7 1075 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 AKT1S1Q96B36 256 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ZNF653Q96CK0 615 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TIPINQ9BVW5 301 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 MTFR1LQ9H019 292 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CARD9Q9H257 536 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CCDC134Q9H6E4 229 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 AZI2Q9H6S1 392 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TUFT1Q9NNX1 390 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 NKX1-2Q9UD57 310 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 CIDEBQ9UHD4 219 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 USTQ9Y2C2 406 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 LRCH1Q9Y2L9 728 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CTDP1Q9Y5B0 961 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 CD2APQ9Y5K6 639 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ASTN2O75129 1339 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 FRMPD4Q14CM0 1322 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ANKRD62A6NC57 917 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 MAGEA13PA6NCF6 341 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 LMNAP02545 664 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 TMEM253P0C7T8 217 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TPBGLP0DKB5 382 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ZBTB48P10074 688 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 KCNA3P22001 575 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 MMP13P45452 471 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RPL21P46778 160 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 RARRES1P49788 294 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RPS6P62753 249 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 CETN1Q12798 172 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TMED1Q13445 227 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 LONRF1Q17RB8 773 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PARP6Q2NL67 630 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SPOPLQ6IQ16 392 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 XXYLT1Q8NBI6 393 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SMC1BQ8NDV3 1235 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TAS1R2Q8TE23 839 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ATP8B4Q8TF62 1192 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 POMGNT1Q8WZA1 660 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ZNF668Q96K58 619 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 NUDCD1Q96RS6 583 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PRMT1Q99873 361 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 MXRA8Q9BRK3 442 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 ERP44Q9BS26 406 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 NUP85Q9BW27 656 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TMEM117Q9H0C3 514 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RANBP17Q9H2T7 1088 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 OCEL1Q9H607 264 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TXLNGQ9NUQ3 528 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RHBDL2Q9NX52 303 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PAIP2BQ9ULR5 123 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 ZMYND8Q9ULU4 1186 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 ARL2BPQ9Y2Y0 163 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 MRPL11Q9Y3B7 192 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms