RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 VWCEQ96DN2 955 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 TOPORSQ9NS56 1045 aaPredicted RBP16.05■□□□□ 0.16
CAPN3-207ENST00000397200 PARP2Q9UGN5 583 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 MYH10P35580 1976 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 RECQL4O94761 1208 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 IL18RAPO95256 599 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 ACRP10323 421 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 ACTN1P12814 892 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 SLC9A1P19634 815 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 AKAP5P24588 427 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 ANXA13P27216 316 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 APBA1Q02410 837 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 PSMD6Q15008 389 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 SURF1Q15526 300 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
CAPN3-207ENST00000397200 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
CAPN3-207ENST00000397200 TMC2Q8TDI7 906 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 FNBP1Q96RU3 617 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 LBHD1Q9BQE6 289 aaPredicted RBP16.05■□□□□ 0.16
CAPN3-207ENST00000397200 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
CAPN3-207ENST00000397200 TRIP11Q15643 1979 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 EOMESO95936 686 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
CAPN3-207ENST00000397200 FAM189BP81408 668 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 ENPEPQ07075 957 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 ASIC2Q16515 512 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 SLC10A6Q3KNW5 377 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 LPPQ93052 612 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
CAPN3-207ENST00000397200 PLEKHA5Q9HAU0 1116 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 PDE11AQ9HCR9 933 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-207ENST00000397200 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 FHOD1Q9Y613 1164 aa16.04■□□□□ 0.16
CAPN3-207ENST00000397200 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-207ENST00000397200 LACTBL1A8MY62 500 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 EFCAB14O75071 495 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 ATF7P17544 494 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-207ENST00000397200 MAGEA1P43355 309 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 FMO5P49326 533 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 TDRD12Q587J7 1177 aaKnown RBP16.03■□□□□ 0.16
CAPN3-207ENST00000397200 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 ZNF598Q86UK7 904 aaKnown RBP16.03■□□□□ 0.16
CAPN3-207ENST00000397200 CD302Q8IX05 232 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 TRIM58Q8NG06 486 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 SNX27Q96L92 541 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 ASB7Q9H672 318 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 UBN1Q9NPG3 1134 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 KLK14Q9P0G3 267 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 LRFN2Q9ULH4 789 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 NENFQ9UMX5 172 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 GIT1Q9Y2X7 761 aa16.03■□□□□ 0.16
CAPN3-207ENST00000397200 BZW2Q9Y6E2 419 aaKnown RBP16.03■□□□□ 0.16
CAPN3-207ENST00000397200 PDCD11Q14690 1871 aaKnown RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 LRRIQ3A6PVS8 624 aaPredicted RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 MEIS3P2A8K0S8 358 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 BAIAP3O94812 1187 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 FGBP02675 491 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 TNNI1P19237 187 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 WNT7BP56706 349 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 DLG4P78352 724 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 PSRC1Q6PGN9 363 aaPredicted RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.16
CAPN3-207ENST00000397200 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 PCDHB7Q9Y5E2 793 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 DUSP10Q9Y6W6 482 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 TTC3P53804 2025 aa16.02■□□□□ 0.16
CAPN3-207ENST00000397200 MEFVO15553 781 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 KLHL30Q0D2K2 578 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 WDR49Q8IV35 697 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 MSANTD4Q8NCY6 345 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 RPS6KC1Q96S38 1066 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 POP1Q99575 1024 aaKnown RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CNTN3Q9P232 1028 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 AJAP1Q9UKB5 411 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-207ENST00000397200 CAPN6Q9Y6Q1 641 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 BTNL10A8MVZ5 291 aa16.01■□□□□ 0.15
CAPN3-207ENST00000397200 TACC1O75410 805 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms