RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SOX4Q06945 474 aaPredicted RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 PPP2R5AQ15172 486 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 APBB1IPQ7Z5R6 666 aaPredicted RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 HS6ST3Q8IZP7 471 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 CSGALNACT1Q8TDX6 532 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 ZNF512Q96ME7 567 aaPredicted RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 TM6SF1Q9BZW5 370 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 GPR88Q9GZN0 384 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 C8orf33Q9H7E9 229 aaPredicted RBP16.44■□□□□ 0.22
SEC13-206ENST00000397102 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 TUFT1Q9NNX1 390 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 FBXL5Q9UKA1 691 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 MAFFQ9ULX9 164 aa16.44■□□□□ 0.22
SEC13-206ENST00000397102 CFAP47Q6ZTR5 3102 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 CITO14578 2027 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 CACNA1GO43497 2377 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 HEPACAM2A8MVW5 462 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 PODXLO00592 558 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 CHADO15335 359 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 MYL4P12829 197 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 HOXA6P31267 233 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 AASDHQ4L235 1098 aaPredicted RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 XKR4Q5GH76 650 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 DGKKQ5KSL6 1271 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 N4BP2L1Q5TBK1 243 aaPredicted RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 HEATR6Q6AI08 1181 aaKnown RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 CEP68Q76N32 757 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 YAF2Q8IY57 180 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 MTMR9Q96QG7 549 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 NACC1Q96RE7 527 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 ASAH2Q9NR71 780 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 RBM12Q9NTZ6 932 aaKnown RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 SLC38A7Q9NVC3 462 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 CEP72Q9P209 647 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 AFF4Q9UHB7 1163 aaKnown RBP16.43■□□□□ 0.22
SEC13-206ENST00000397102 SPAG17Q6Q759 2223 aa16.43■□□□□ 0.22
SEC13-206ENST00000397102 TM4SF5O14894 197 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
SEC13-206ENST00000397102 MED24O75448 989 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 GJA1P17302 382 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 CYP11B2P19099 503 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 GRM5P41594 1212 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 KPNA1P52294 538 aaPredicted RBP16.42■□□□□ 0.22
SEC13-206ENST00000397102 EFNA5P52803 228 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 YARSP54577 528 aaKnown RBP16.42■□□□□ 0.22
SEC13-206ENST00000397102 TWF1Q12792 350 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 TEAD2Q15562 447 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 PADI6Q6TGC4 694 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 ALKAL1Q6UXT8 129 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 Q6ZS52 159 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 WDR5BQ86VZ2 330 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 WASF1Q92558 559 aa16.42■□□□□ 0.22
SEC13-206ENST00000397102 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
SEC13-206ENST00000397102 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
SEC13-206ENST00000397102 SLC38A8A6NNN8 435 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 WDR44Q5JSH3 913 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 CEP120Q8N960 986 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
SEC13-206ENST00000397102 SHKBP1Q8TBC3 707 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 LOXL4Q96JB6 756 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 POLR3CQ9BUI4 534 aaPredicted RBP16.41■□□□□ 0.22
SEC13-206ENST00000397102 KIFC3Q9BVG8 833 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 PDRG1Q9NUG6 133 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
SEC13-206ENST00000397102 TNFSF13BQ9Y275 285 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
SEC13-206ENST00000397102 MYBPHLA2RUH7 354 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 SPECC1L-ADORA2AF8WAN1 911 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 WNT7AO00755 349 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 CTHP32929 405 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 RPL9P32969 192 aaKnown RBP16.4■□□□□ 0.22
SEC13-206ENST00000397102 SOX9P48436 509 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 SF3A2Q15428 464 aaKnown RBP16.4■□□□□ 0.22
SEC13-206ENST00000397102 TXNDC11Q6PKC3 985 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 RALGPS2Q86X27 583 aaPredicted RBP16.4■□□□□ 0.22
SEC13-206ENST00000397102 FAM200AQ8TCP9 573 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 RSPRY1Q96DX4 576 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 ZMAT2Q96NC0 199 aaKnown RBP16.4■□□□□ 0.22
SEC13-206ENST00000397102 CDT1Q9H211 546 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 ARRDC1-AS1Q9H2J1 176 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
SEC13-206ENST00000397102 KIF26AQ9ULI4 1882 aaPredicted RBP16.39■□□□□ 0.22
SEC13-206ENST00000397102 AXIN1O15169 862 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 PFKFB2O60825 505 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 DTNBO60941 627 aa16.39■□□□□ 0.21
SEC13-206ENST00000397102 EPN2O95208 641 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms