RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 FCHO2Q0JRZ9 810 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ACAP1Q15027 740 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 DCAF4L1Q3SXM0 396 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ELMOD1Q8N336 334 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 SYNPOQ8N3V7 929 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 GAB3Q8WWW8 586 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 RSPRY1Q96DX4 576 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF512Q96ME7 567 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-202ENST00000396629 CEP72Q9P209 647 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 GDAQ9Y2T3 454 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ATRXP46100 2492 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 CCDC163A0A0D9SF12 145 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 SYN3O14994 580 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 PRKCBP05771 671 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 C1QTNF9P0C862 333 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 SOX9P48436 509 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-202ENST00000396629 TOB2Q14106 344 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-202ENST00000396629 CCDC6Q16204 474 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 MAPK6Q16659 721 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 XKR4Q5GH76 650 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 GLRA4Q5JXX5 417 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 TXNDC11Q6PKC3 985 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 UNQ6494/PRO21346Q6UXR6 183 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 PIK3AP1Q6ZUJ8 805 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 CACNA2D4Q7Z3S7 1137 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 RALGPS2Q86X27 583 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-202ENST00000396629 MCPH1Q8NEM0 835 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF274Q96GC6 653 aaPredicted RBP9.28□□□□□ -0.92
SCFD1-202ENST00000396629 CCDC43Q96MW1 224 aaKnown RBP9.28□□□□□ -0.92
SCFD1-202ENST00000396629 GOLGA2P5Q9HBQ8 144 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 FBXL5Q9UKA1 691 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 USP20Q9Y2K6 914 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 PCDHGA5Q9Y5G8 931 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 CITO14578 2027 aa9.28□□□□□ -0.92
SCFD1-202ENST00000396629 A0A087WWV3 80 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 SMIM28A0A1B0GU29 152 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 SLC38A8A6NNN8 435 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 SPECC1L-ADORA2AF8WAN1 911 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 CPLX1O14810 134 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 MYL4P12829 197 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 GJA1P17302 382 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 PSMA5P28066 241 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 CTHP32929 405 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 ARPP19P56211 112 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 SOX4Q06945 474 aaPredicted RBP9.27□□□□□ -0.92
SCFD1-202ENST00000396629 TWF1Q12792 350 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 CCINQ13939 588 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 TEAD2Q15562 447 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.92
SCFD1-202ENST00000396629 ALKAL1Q6UXT8 129 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 MAEAQ7L5Y9 396 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 KBTBD6Q86V97 674 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 YAF2Q8IY57 180 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 SHKBP1Q8TBC3 707 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 OXER1Q8TDS5 423 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 BSNDQ8WZ55 320 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 ZC3H10Q96K80 434 aaKnown RBP9.27□□□□□ -0.92
SCFD1-202ENST00000396629 TMEM121BQ9BXQ6 578 aaPredicted RBP9.27□□□□□ -0.92
SCFD1-202ENST00000396629 LRRC3Q9BY71 257 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 ASAH2Q9NR71 780 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 AFF4Q9UHB7 1163 aaKnown RBP9.27□□□□□ -0.92
SCFD1-202ENST00000396629 PCDHA12Q9UN75 941 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 WASF3Q9UPY6 502 aa9.27□□□□□ -0.92
SCFD1-202ENST00000396629 CDC45O75419 566 aa9.27□□□□□ -0.93
SCFD1-202ENST00000396629 RPP40O75818 363 aaKnown RBP9.27□□□□□ -0.93
SCFD1-202ENST00000396629 AKAP3O75969 853 aa9.27□□□□□ -0.93
SCFD1-202ENST00000396629 NT5DC1Q5TFE4 455 aa9.27□□□□□ -0.93
SCFD1-202ENST00000396629 PSAPL1Q6NUJ1 521 aa9.27□□□□□ -0.93
SCFD1-202ENST00000396629 SDK1Q7Z5N4 2213 aa9.27□□□□□ -0.93
SCFD1-202ENST00000396629 TMEM8BA6NDV4 472 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 PODXLO00592 558 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 ATP2B1P20020 1258 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 NAMPTP43490 491 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 PON2Q15165 354 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 CTXN3Q4LDR2 81 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 CPLX2Q6PUV4 134 aaKnown RBP9.26□□□□□ -0.93
SCFD1-202ENST00000396629 TMC8Q8IU68 726 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 LRRC3BQ96PB8 259 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 VPS45Q9NRW7 570 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 NUP205Q92621 2012 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 EXTL3O43909 919 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 SPATA31C1P0DKV0 1188 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 MPLP40238 635 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 GRM5P41594 1212 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 ATF7IP2Q5U623 682 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 RNF43Q68DV7 783 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 RUFY3Q7L099 469 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 MKNK1Q9BUB5 465 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms