RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZYXQ15942 572 aaKnown RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 CLEC16AQ2KHT3 1053 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 SPDYAQ5MJ70 313 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ANKRD20A2Q5SQ80 823 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ANKRD20A1Q5TYW2 823 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ANKRD20A3Q5VUR7 823 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ZSWIM2Q8NEG5 633 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 DENND1AQ8TEH3 1009 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 DDX27Q96GQ7 796 aaKnown RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 TMEM237Q96Q45 408 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 MLXIPLQ9NP71 852 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 UBN1Q9NPG3 1134 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 TXLNGQ9NUQ3 528 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 RNF181Q9P0P0 153 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ANAPC5Q9UJX4 755 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ZNFX1Q9P2E3 1918 aaKnown RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 E7ENQ6 273 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ADRB2P07550 413 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 UNGP13051 313 aaPredicted RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 GNAZP19086 355 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ADSSP30520 456 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 WDR4P57081 412 aaKnown RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 IL9RQ01113 521 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 NR1H3Q13133 447 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 SNX1Q13596 522 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 MOGSQ13724 837 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ZKSCAN8Q15776 578 aaPredicted RBP14.16□□□□□ -0.14
TRIM40-207ENST00000396581 CCNG2Q16589 344 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 KRT39Q6A163 491 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 TDRPQ86YL5 185 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 KIRREL3Q8IZU9 778 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ANKRD35Q8N283 1001 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 ATG4AQ8WYN0 398 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 PITPNM3Q9BZ71 974 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 TRIM33Q9UPN9 1127 aa14.16□□□□□ -0.14
TRIM40-207ENST00000396581 FAM47DPA6NHR8 397 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 IPO5O00410 1097 aaKnown RBP14.15□□□□□ -0.14
TRIM40-207ENST00000396581 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
TRIM40-207ENST00000396581 PRPF4O43172 522 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRIM40-207ENST00000396581 LYPLA2O95372 231 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 MAPK4P31152 587 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 RARRES1P49788 294 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
TRIM40-207ENST00000396581 GRIK3Q13003 919 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 BLMHQ13867 455 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CCDC142Q17RM4 750 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CMPK2Q5EBM0 449 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CDCA2Q69YH5 1023 aaPredicted RBP14.15□□□□□ -0.14
TRIM40-207ENST00000396581 NSMFQ6X4W1 530 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CEP128Q6ZU80 1094 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 SCYL3Q8IZE3 742 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CCDC89Q8N998 374 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 INPP5DQ92835 1189 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 KIFAP3Q92845 792 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 CCDC77Q9BR77 488 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 TMEM8AQ9HCN3 771 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 ANAPC7Q9UJX3 599 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 STK38LQ9Y2H1 464 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
TRIM40-207ENST00000396581 P4HBP07237 508 aaKnown RBP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 MYBL1P10243 752 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 RRM1P23921 792 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 NCKAP1LP55160 1127 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 HAUS6Q7Z4H7 955 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 SRRM1Q8IYB3 904 aaKnown RBP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 AGGF1Q8N302 714 aaeCLIP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 MXRA8Q9BRK3 442 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 ETNK1Q9HBU6 452 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 ADARB2Q9NS39 739 aaKnown RBP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 FBXO28Q9NVF7 368 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 CORO1CQ9ULV4 474 aaPredicted RBP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 R3HDM2Q9Y2K5 976 aaKnown RBP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 SMCHD1A6NHR9 2005 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 KLRC2P26717 231 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 GCAP28676 217 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 ADCY8P40145 1251 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 ENPEPQ07075 957 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 SUPT20HL1Q3ZLR7 823 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 ANKS1BQ7Z6G8 1248 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 TRABD2AQ86V40 505 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 MCOLN2Q8IZK6 566 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 TMC2Q8TDI7 906 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 SH3TC2Q8TF17 1288 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 KLRG1Q96E93 195 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 NT5C1BQ96P26 610 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 WRNIP1Q96S55 665 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 MYLK2Q9H1R3 596 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRIM40-207ENST00000396581 LRRC42Q9Y546 428 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 USH1CQ9Y6N9 552 aa14.14□□□□□ -0.15
TRIM40-207ENST00000396581 TRAFD1O14545 582 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-207ENST00000396581 CLGNO14967 610 aa14.13□□□□□ -0.15
TRIM40-207ENST00000396581 PPP1R12AO14974 1030 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms