RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 THAP12O43422 761 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 CXCL8P10145 99 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 POU5F1BQ06416 359 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 GRIK4Q16099 956 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 DGKDQ16760 1214 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 CST9Q5W186 159 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 PASD1Q8IV76 773 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ALG3Q92685 438 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 ZSWIM1Q9BR11 485 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 GDF3Q9NR23 364 aa12.98□□□□□ -0.33
ITGB1-202ENST00000396033 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-202ENST00000396033 MYO1CO00159 1063 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 SPOPO43791 374 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 ZEB2O60315 1214 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 ITGA4P13612 1032 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 EPHB4P54760 987 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■■□□ 15.5
ITGB1-202ENST00000396033 MCOLN2Q8IZK6 566 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 KRT35Q92764 455 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CYFIP2Q96F07 1278 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 TRIM11Q96F44 468 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
ITGB1-202ENST00000396033 VIPAS39Q9H9C1 493 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-202ENST00000396033 MARCKSL1P49006 195 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 FAM187BQ17R55 369 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 SGSM1Q2NKQ1 1148 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 NAP1L3Q99457 506 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-202ENST00000396033 HPCAL4Q9UM19 191 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CNTN6Q9UQ52 1028 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 B4GALT4O60513 344 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CYP1A1P04798 512 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-202ENST00000396033 MYBL1P10243 752 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CD58P19256 250 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CENPCQ03188 943 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 AMHR2Q16671 573 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 SCARA5Q6ZMJ2 495 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
ITGB1-202ENST00000396033 GPR25O00155 361 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 ADCY6O43306 1168 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 IL18RAPO95256 599 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 TNFAIP2Q03169 654 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-202ENST00000396033 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 PDZD7Q9H5P4 517 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
ITGB1-202ENST00000396033 CFHP08603 1231 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-202ENST00000396033 CARSP49589 748 aaKnown RBP12.96□□□□□ -0.33
ITGB1-202ENST00000396033 PAK2Q13177 524 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 EMBQ6PCB8 327 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 PHLDB2Q86SQ0 1253 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 UBR7Q8N806 425 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-202ENST00000396033 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.33
ITGB1-202ENST00000396033 GOLGA6L10A0A0M3HER8 536 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 IGF2BP3O00425 579 aaKnown RBP eCLIP12.96□□□□□ -0.34
ITGB1-202ENST00000396033 STAG3L1P0CL83 205 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 MCF2P10911 925 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 RRM1P23921 792 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF132P52740 706 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 C2CD6Q53TS8 623 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 HSP90B2PQ58FF3 399 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.34
ITGB1-202ENST00000396033 CPNE8Q86YQ8 564 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 CASKIN2Q8WXE0 1202 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 NFU1Q9UMS0 254 aa12.96□□□□□ -0.34
ITGB1-202ENST00000396033 KRT19P08727 400 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 NOMO3P69849 1222 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
ITGB1-202ENST00000396033 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
ITGB1-202ENST00000396033 NFICP08651 508 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 ARF4P18085 180 aaPredicted RBP12.95□□□□□ -0.34
ITGB1-202ENST00000396033 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 CLUL1Q15846 466 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 MARCH8Q5T0T0 291 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 CD101Q93033 1021 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 ERLIN2O94905 339 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms