RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RAB27AP51159 221 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PLXNA3P51805 1871 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 IKQ13123 557 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 CYP1B1Q16678 543 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 FAM153CQ494X1 144 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 LRIG3Q6UXM1 1119 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ADGRA3Q8IWK6 1321 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 MYCT1Q8N699 235 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PLEKHO2Q8TD55 490 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 BSNDQ8WZ55 320 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CD101Q93033 1021 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PBKQ96KB5 322 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 SPAG5Q96R06 1193 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CGRRF1Q99675 332 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 INTS2Q9H0H0 1204 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 PLEKHA5Q9HAU0 1116 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 TMEM165Q9HC07 324 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 TXNRD2Q9NNW7 524 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 FAM153AQ9UHL3 310 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 NAGPAQ9UK23 515 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PCDHGC3Q9UN70 934 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 SQORQ9Y6N5 450 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 DUSP10Q9Y6W6 482 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 LTBP2Q14767 1821 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 TCRBV5S1A1TA0A578 114 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 FAM155AB1AL88 458 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 AHCYL1O43865 530 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 GCNT3O95395 438 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 C22orf31O95567 290 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ECEL1O95672 775 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 LSM8O95777 96 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 GSTA1P08263 222 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 SLC10A3P09131 477 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 TRIM21P19474 475 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 AXLP30530 894 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 DUSP28Q4G0W2 176 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CCDC181Q5TID7 509 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 KRT39Q6A163 491 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CAPRIN2Q6IMN6 1127 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 BRSK2Q8IWQ3 736 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 IFT20Q8IY31 132 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ARFGAP2Q8N6H7 521 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 EFCAB3Q8N7B9 438 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 C12orf50Q8NA57 414 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 STAMBPL1Q96FJ0 436 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ZNF570Q96NI8 536 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 OSBPL9Q96SU4 736 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 MMP19Q99542 508 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 BCO2Q9BYV7 579 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ZNF518BQ9C0D4 1074 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CPSF3Q9UKF6 684 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 SLC12A4Q9UP95 1085 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 MCM3APO60318 1980 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 A6NHS1 94 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 H0YGN5 161 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 GLI1P08151 1106 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ACO1P21399 889 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 TBXAS1P24557 533 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 ATICP31939 592 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 HSPA9P38646 679 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 CARSP49589 748 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 DRG2P55039 364 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 PTENP60484 403 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PTPN11Q06124 597 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 PAK2Q13177 524 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PTPROQ16827 1216 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 C17orf99Q6UX52 265 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 SYCE1Q8N0S2 351 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PIP4P2Q8N4L2 257 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 NIPA2Q8N8Q9 360 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 SOCS4Q8WXH5 440 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 HPS3Q969F9 1004 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 TRIM11Q96F44 468 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 C16orf70Q9BSU1 422 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PHACTR1Q9C0D0 580 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 YIPF3Q9GZM5 350 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS41-203ENST00000395969 GTF2IRD1Q9UHL9 959 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 NFS1Q9Y697 457 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 PTPRDP23468 1912 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 MROH7Q68CQ1 1323 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 RRN3P2A6NIE6 340 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ACKR2O00590 384 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 DPYSL4O14531 572 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 ANP32DO95626 131 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ERBB2P04626 1255 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 PYGLP06737 847 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 MCF2P10911 925 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 EIF2AK2P19525 551 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 CNGA1P29973 690 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 NMT1P30419 496 aaKnown RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 CCNG1P51959 295 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 BPIFB4P59827 614 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 BLMHQ13867 455 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 ZNF268Q14587 947 aaPredicted RBP5.72□□□□□ -1.49
VPS41-203ENST00000395969 TTLL4Q14679 1199 aa5.72□□□□□ -1.49
VPS41-203ENST00000395969 PDCD2Q16342 344 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms