RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NOTUMQ6P988 496 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TBC1D16Q8TBP0 767 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 STAMBPL1Q96FJ0 436 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PAK5Q9P286 719 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PSMC3IPQ9P2W1 217 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 EXTL3O43909 919 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HBP1O60381 514 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 RPLP2P05387 115 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 VCPP55072 806 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HNRNPH2P55795 449 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 INPP5AQ14642 412 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TAS2R42Q7RTR8 314 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF555Q8NEP9 628 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PARK7Q99497 189 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 VPS33BQ9H267 617 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 GOLPH3Q9H4A6 298 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 CNOT7Q9UIV1 285 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 AGAP1Q9UPQ3 857 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 VPS9D1Q9Y2B5 631 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 KRT8P05787 483 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HARS2P49590 506 aaKnown RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 HMGCS2P54868 508 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 EFHC1Q5JVL4 640 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 TTC39BQ5VTQ0 682 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-204ENST00000395898 LRRC8EQ6NSJ5 796 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 FAM161BQ96MY7 647 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA16Q9BXB7 569 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PSD3Q9NYI0 1048 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 ITM2BQ9Y287 266 aa5.73□□□□□ -1.49
VPS13C-204ENST00000395898 PIK3C2BO00750 1634 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 HSPA1AP0DMV8 641 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 HSPA1BP0DMV9 641 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ARHGEF7Q14155 803 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 NBPF20Q3BBV1 942 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MMS22LQ6ZRQ5 1243 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 LINC00523Q86TU6 105 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 NLRP14Q86W24 1093 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 C1orf54Q8WWF1 131 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SEPT1Q8WYJ6 367 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FRMD8P1Q9BZ68 369 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 EPN3Q9H201 632 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ECT2Q9H8V3 914 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ANKEF1Q9NU02 776 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MORC2Q9Y6X9 1032 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 LRRIQ1Q96JM4 1722 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MYCP01106 439 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PDGFRAP16234 1089 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ALDH1A3P47895 512 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 LAMC2Q13753 1193 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 GLB1LQ6UWU2 654 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 C3orf62Q6ZUJ4 267 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TTC30BQ8N4P2 665 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MXRA8Q9BRK3 442 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ROPN1BQ9BZX4 212 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ROPN1Q9HAT0 212 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CASS4Q9NQ75 786 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 NYAP2Q9P242 653 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 FAM32AQ9Y421 112 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 H0Y3Z8 333 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 KDM1AO60341 852 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ATP1A1P05023 1023 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 RARBP10826 455 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 NFIXQ14938 502 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 C16orf89Q6UX73 402 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 GRID1Q9ULK0 1009 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ARL2BPQ9Y2Y0 163 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PP2D1A8MPX8 630 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF609O15014 1411 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TEX33O43247 280 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PPLO60437 1756 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 KLHL2O95198 593 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MOCS2O96007 188 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ARID5BQ14865 1188 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 METTL16Q86W50 562 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TADA1Q96BN2 335 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PRR12Q9ULL5 1215 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CLCA2Q9UQC9 943 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA31A6Q5VVP1 1343 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 JCADQ9P266 1359 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 APOA4P06727 396 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 AKR1B1P15121 316 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SREBF2Q12772 1141 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 DACH2Q96NX9 599 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MUC3BQ9H195 1237 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 ZFYVE28Q9HCC9 887 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 HDAC6Q9UBN7 1215 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 BLOC1S6Q9UL45 172 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CSF1RP07333 972 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TRIM49P0CI25 452 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 TRIM49CP0CI26 452 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MTFR1Q15390 333 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SETD3Q86TU7 594 aaPredicted RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SHCBP1Q8NEM2 672 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 CHST13Q8NET6 341 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 THOC1Q96FV9 657 aaKnown RBP5.72□□□□□ -1.49
VPS13C-204ENST00000395898 MCEEQ96PE7 176 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 SLITRK1Q96PX8 696 aa5.72□□□□□ -1.49
VPS13C-204ENST00000395898 RBM15Q96T37 977 aaKnown RBP eCLIP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms