RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PADI6Q6TGC4 694 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 DEPDC1BQ8WUY9 529 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 CEP72Q9P209 647 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 FBXL5Q9UKA1 691 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 BTBD18B2RXH4 712 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 K7ESF4 209 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 PODXLO00592 558 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 EPB41L2O43491 1005 aaKnown RBP17.38■□□□□ 0.37
SNCA-205ENST00000394991 HOXC13P31276 330 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 PTGDRQ13258 359 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 XKR4Q5GH76 650 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 Q6ZS52 159 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 ZSCAN18Q8TBC5 510 aaPredicted RBP17.38■□□□□ 0.37
SNCA-205ENST00000394991 RSPRY1Q96DX4 576 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 ZMAT2Q96NC0 199 aaKnown RBP17.38■□□□□ 0.37
SNCA-205ENST00000394991 NACC1Q96RE7 527 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 RBM12Q9NTZ6 932 aaKnown RBP17.38■□□□□ 0.37
SNCA-205ENST00000394991 C2orf42Q9NWW7 574 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
SNCA-205ENST00000394991 ZNF263O14978 683 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 SYN3O14994 580 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 NEFLP07196 543 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 GRM5P41594 1212 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 EPHA5P54756 1037 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 TWF1Q12792 350 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 CYP4A22Q5TCH4 519 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 ALKAL1Q6UXT8 129 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.37■□□□□ 0.37
SNCA-205ENST00000394991 MFSD6LQ8IWD5 586 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 SPEM1Q8N4L4 309 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 WASF1Q92558 559 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
SNCA-205ENST00000394991 CDT1Q9H211 546 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 TRPV4Q9HBA0 871 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 BRMS1Q9HCU9 246 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 ANK1P16157 1881 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 FAM208BQ5VWN6 2430 aa17.37■□□□□ 0.37
SNCA-205ENST00000394991 ARHGEF35A5YM69 484 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 HEPACAM2A8MVW5 462 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
SNCA-205ENST00000394991 PAPSS2O95340 614 aaPredicted RBP17.36■□□□□ 0.37
SNCA-205ENST00000394991 MYL4P12829 197 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 SOX9P48436 509 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 OSTNP61366 133 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 PPP2R5AQ15172 486 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 TEAD2Q15562 447 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 CTXN3Q4LDR2 81 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 TPGS2Q68CL5 300 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 HEATR6Q6AI08 1181 aaKnown RBP17.36■□□□□ 0.37
SNCA-205ENST00000394991 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
SNCA-205ENST00000394991 SHKBP1Q8TBC3 707 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 TNFSF13BQ9Y275 285 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 MYH11P35749 1972 aa17.36■□□□□ 0.37
SNCA-205ENST00000394991 SLC38A8A6NNN8 435 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 H7C4K7 107 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 KCNA4P22459 653 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 RPA1P27694 616 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 EFNA5P52803 228 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 FOSBP53539 338 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 TXNDC11Q6PKC3 985 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 ELMOD1Q8N336 334 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 FAM160A2Q8N612 972 aaPredicted RBP17.35■□□□□ 0.37
SNCA-205ENST00000394991 C18orf25Q96B23 403 aaPredicted RBP17.35■□□□□ 0.37
SNCA-205ENST00000394991 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
SNCA-205ENST00000394991 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
SNCA-205ENST00000394991 PTPRHQ9HD43 1115 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 ASAH2Q9NR71 780 aa17.35■□□□□ 0.37
SNCA-205ENST00000394991 AFF4Q9UHB7 1163 aaKnown RBP17.35■□□□□ 0.37
SNCA-205ENST00000394991 LARGE1O95461 756 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 VNN2O95498 520 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 MCM7P33993 719 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 CNR2P34972 360 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 YARSP54577 528 aaKnown RBP17.34■□□□□ 0.37
SNCA-205ENST00000394991 MLLT6P55198 1093 aaPredicted RBP17.34■□□□□ 0.37
SNCA-205ENST00000394991 ECM1Q16610 540 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 RNF19BQ6ZMZ0 732 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 NECAB1Q8N987 351 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 LEMD2Q8NC56 503 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 SUSD3Q96L08 255 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 IFT74Q96LB3 600 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 ACO2Q99798 780 aaKnown RBP17.34■□□□□ 0.37
SNCA-205ENST00000394991 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
SNCA-205ENST00000394991 SLC38A7Q9NVC3 462 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 YIPF1Q9Y548 306 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 NUB1Q9Y5A7 615 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
SNCA-205ENST00000394991 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.37
SNCA-205ENST00000394991 TSC2P49815 1807 aa17.33■□□□□ 0.37
SNCA-205ENST00000394991 PHLPP2Q6ZVD8 1323 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 ABLIM1O14639 778 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 KCNE1P15382 129 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 PMLP29590 882 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 LRRC32Q14392 662 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 ZNF280DQ6N043 979 aa17.33■□□□□ 0.36
SNCA-205ENST00000394991 TAS1R3Q7RTX0 852 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms