RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 UBR7Q8N806 425 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 MTMR12Q9C0I1 747 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.89□□□□□ -0.03
SNCA-204ENST00000394989 PCYOX1Q9UHG3 505 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 PPME1Q9Y570 386 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 PPFIA4O75335 1185 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 PRKCBP05771 671 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 GNA15P30679 374 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 MAPK4P31152 587 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 NF2P35240 595 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 NOMO3P69849 1222 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 MXD4Q14582 209 aaPredicted RBP14.89□□□□□ -0.03
SNCA-204ENST00000394989 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 RBBP8NLQ8NC74 664 aaPredicted RBP14.89□□□□□ -0.03
SNCA-204ENST00000394989 BCAS4Q8TDM0 211 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 TXLNGYQ9BZA5 131 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CENPFP49454 3210 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 RARAP10276 462 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CYP2C8P10632 490 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CHRNA3P32297 505 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 NSFP46459 744 aaKnown RBP14.89□□□□□ -0.03
SNCA-204ENST00000394989 RWDD2BP57060 319 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 MCL1Q07820 350 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 LLGL1Q15334 1064 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CYP1B1Q16678 543 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 RHPN2Q8IUC4 686 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 WDR49Q8IV35 697 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 ABRAQ8N0Z2 381 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 TCHPQ9BT92 498 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CENPHQ9H3R5 247 aa14.89□□□□□ -0.03
SNCA-204ENST00000394989 CPSF3Q9UKF6 684 aaKnown RBP14.89□□□□□ -0.03
SNCA-204ENST00000394989 B4GALT5O43286 388 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 ECM2O94769 699 aaPredicted RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 ASS1P00966 412 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 IQCF3P0C7M6 154 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 TXNP10599 105 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 HSPA6P17066 643 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 PROZP22891 400 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 ZNF132P52740 706 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 ZDHHC24Q6UX98 284 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 USP50Q70EL3 339 aaPredicted RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 FASTKD5Q7L8L6 764 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 MAGOHBQ96A72 148 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 LRRC45Q96CN5 670 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 L3MBTL3Q96JM7 780 aaPredicted RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 LRRC4CQ9HCJ2 640 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 PTPRHQ9HD43 1115 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 FAM187AA6NFU0 413 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 OSBPP22059 807 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 TBXAS1P24557 533 aaPredicted RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 EPHX2P34913 555 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 MAPK6Q16659 721 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 MPHOSPH6Q99547 160 aaKnown RBP14.88□□□□□ -0.03
SNCA-204ENST00000394989 HERPUD2Q9BSE4 406 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 FAM107BQ9H098 131 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 MROH8Q9H579 483 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 MINDY3Q9H8M7 445 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 GRHL1Q9NZI5 618 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 GRIN2DO15399 1336 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 ANK1P16157 1881 aa14.88□□□□□ -0.03
SNCA-204ENST00000394989 O00370 1275 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 OGTO15294 1046 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 GAS2O43903 313 aaKnown RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 MYBL1P10243 752 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 ZNF844Q08AG5 666 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 GRM1Q13255 1194 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 CEP85LQ5SZL2 805 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 CDR2LQ86X02 465 aaPredicted RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 ZC3H15Q8WU90 426 aaKnown RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 FMO2Q99518 471 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 C11orf70Q9BRQ4 267 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 SYT17Q9BSW7 474 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 RNPEPQ9H4A4 650 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 SNX24Q9Y343 169 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 HOXC6P09630 235 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 MYL6P60660 151 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 DHX9Q08211 1270 aaKnown RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 LRIG3Q6UXM1 1119 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 CEP120Q8N960 986 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 FAM169AQ9Y6X4 670 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 EVPLQ92817 2033 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 ZEB2O60315 1214 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 IRAK1P51617 712 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 CLCN3P51790 818 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 DRG2P55039 364 aaKnown RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 MAMLD1Q13495 774 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 MMS22LQ6ZRQ5 1243 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 TSHZ1Q6ZSZ6 1077 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 FBXO25Q8TCJ0 367 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 UBLCP1Q8WVY7 318 aaPredicted RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 ATP6V1G3Q96LB4 118 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 NLRP4Q96MN2 994 aa14.87□□□□□ -0.03
SNCA-204ENST00000394989 JPH2Q9BR39 696 aaPredicted RBP14.87□□□□□ -0.03
SNCA-204ENST00000394989 FZD8Q9H461 694 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms