RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZIM3Q96PE6 472 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 TIPINQ9BVW5 301 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 CISHQ9NSE2 258 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 TCRBV7S2A1N4TA0A589 114 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 LGALS2P05162 132 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 FECHP22830 423 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 EFNA5P52803 228 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 FMO1Q01740 532 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 TNFAIP2Q03169 654 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 BCAS4Q8TDM0 211 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 LRRC45Q96CN5 670 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 MINDY3Q9H8M7 445 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 CWC15Q9P013 229 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 ZNF112Q9UJU3 913 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 PRRC2BQ5JSZ5 2229 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 ZBTB22O15209 634 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 OGTO15294 1046 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 STAG3L1P0CL83 205 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 CYP2C9P11712 490 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 C10orf67Q8IYJ2 551 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 FAM71BQ8TC56 605 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 GPR20Q99678 358 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 PTPRJQ12913 1337 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 PJA2O43164 708 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 GARTP22102 1010 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 GNASQ5JWF2 1037 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 DENND2CQ68D51 928 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 TMEM35BQ8NCS4 154 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 DNAJB3Q8WWF6 145 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 C17orf75Q9HAS0 396 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 SAE1Q9UBE0 346 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 ACTN2P35609 894 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 PPP2R5DQ14738 602 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 SEPT7Q16181 437 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 E7EVH7 732 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 NFICP08651 508 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 RFC5P40937 340 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 FAM102AQ5T9C2 384 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 ZNF606Q8WXB4 792 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
SMARCD1-202ENST00000394963 ECEL1O95672 775 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 GAS8O95995 478 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 RALAP11233 206 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 CCT5P48643 541 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 RPL7AP62424 266 aaKnown RBP16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 MROH8Q9H579 483 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 SLC5A4Q9NY91 659 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 HEY1Q9Y5J3 304 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 POC1B-GALNT4F8VUJ3 575 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 RNF8O76064 485 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 ZNF200P98182 395 aaPredicted RBP16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 GUCY1A3Q02108 690 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 PPIL2Q13356 520 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 USP50Q70EL3 339 aaPredicted RBP16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 ZC3H18Q86VM9 953 aaKnown RBP16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 HOOK3Q86VS8 718 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 VPS37BQ9H9H4 285 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 ERVK-5Q9HDB9 667 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 SNTG2Q9NY99 539 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 PIAS1O75925 651 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 PRKCIP41743 596 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 PWWP2AQ96N64 755 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 CACNG4Q9UBN1 327 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 RNF14Q9UBS8 474 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 HESX1Q9UBX0 185 aa16.9■□□□□ 0.3
SMARCD1-202ENST00000394963 POLR2AP24928 1970 aaKnown RBP16.89■□□□□ 0.3
SMARCD1-202ENST00000394963 DNAH12Q6ZR08 3092 aa16.89■□□□□ 0.3
SMARCD1-202ENST00000394963 PPP1R37O75864 691 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 TAS1R3Q7RTX0 852 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 PCYT2Q99447 389 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 SENP7Q9BQF6 1050 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 O00370 1275 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 TGFB3P10600 412 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 RFX6Q8HWS3 928 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 SLC9A9Q8IVB4 645 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 MMGT1Q8N4V1 131 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 FBXO25Q8TCJ0 367 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 HELQQ8TDG4 1101 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 DHX33Q9H6R0 707 aaKnown RBP16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 ARHGAP28Q9P2N2 729 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 TIMM13Q9Y5L4 95 aaPredicted RBP16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 MYO9BQ13459 2157 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 A0A0G2JLL6 359 aaPredicted RBP16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 LYPLA2O95372 231 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 JAM2P57087 298 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 PRRT2Q7Z6L0 340 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms