RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 TRIM62Q9BVG3 475 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 IP6K2Q9UHH9 426 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 PCDHB12Q9Y5F1 795 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 LACTBL1A8MY62 500 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 APOEP02649 317 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ATF2P15336 505 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ALDH1A3P47895 512 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 MTF1Q14872 753 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 SPOPLQ6IQ16 392 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 MICALL1Q8N3F8 863 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 HTATIP2Q9BUP3 242 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 INTS13Q9NVM9 706 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ADAMTS3O15072 1205 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 TREHO43280 583 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 URODP06132 367 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 DNAJB2P25686 324 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 ELF2Q15723 593 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 PBKQ96KB5 322 aa20.55■□□□□ 0.88
CXXC4-201ENST00000394767 FAM200BP0CF97 657 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 CRYBB1P53674 252 aaPredicted RBP20.54■□□□□ 0.88
CXXC4-201ENST00000394767 PTENP60484 403 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 MAPRE1Q15691 268 aaKnown RBP20.54■□□□□ 0.88
CXXC4-201ENST00000394767 GOLGA7BQ2TAP0 167 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 VPS37BQ9H9H4 285 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 ENTPD7Q9NQZ7 604 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 PRPSAP1Q14558 356 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 TIMM13Q9Y5L4 95 aaPredicted RBP20.54■□□□□ 0.88
CXXC4-201ENST00000394767 ADGRG1Q9Y653 693 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 ADGRF2Q8IZF7 708 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 DONSONQ9NYP3 566 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 TAF1P21675 1872 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 FAM237AA0A1B0GTK4 181 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 SLC18A3Q16572 532 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 HIPK3Q9H422 1215 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 RPTORQ8N122 1335 aa20.54■□□□□ 0.88
CXXC4-201ENST00000394767 FOXN3O00409 490 aaPredicted RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 GTF2BQ00403 316 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 GRB14Q14449 540 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 RFFLQ8WZ73 363 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 RNF25Q96BH1 459 aaPredicted RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 HEMGNQ9BXL5 484 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 STK25O00506 426 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 GYPCP04921 128 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 ITIH3Q06033 890 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 CAPN15O75808 1086 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 ZNF467Q7Z7K2 595 aaPredicted RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 TRIM59Q8IWR1 403 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 MED15Q96RN5 788 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 SELENOSQ9BQE4 189 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 RRAGDQ9NQL2 400 aaPredicted RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 GRAP2O75791 330 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 VEGFBP49765 207 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 KCNK9Q9NPC2 374 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 MIF4GDA9UHW6 222 aaKnown RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 PDGFRAP16234 1089 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 JADE1Q6IE81 842 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 PALM2Q8IXS6 379 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 DHX35Q9H5Z1 703 aaKnown RBP20.53■□□□□ 0.88
CXXC4-201ENST00000394767 WDR35Q9P2L0 1181 aa20.53■□□□□ 0.88
CXXC4-201ENST00000394767 SMIM35A0A1B0GVV1 85 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 H7C4K7 107 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 EFHC2Q5JST6 749 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 CTAGE3PQ8IX95 158 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 GDAP1L1Q96MZ0 367 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 TMEM117Q9H0C3 514 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 TNFSF13BQ9Y275 285 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 RAP1GAPP47736 663 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 HYIQ5T013 277 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 SLC8A2Q9UPR5 921 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 SSU72P8A0A1W2PR75 194 aa20.52■□□□□ 0.88
CXXC4-201ENST00000394767 ZNF500O60304 480 aaPredicted RBP20.52■□□□□ 0.88
CXXC4-201ENST00000394767 H0YHG0 523 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 MAN1A1P33908 653 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 GALCP54803 685 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 MDM2Q00987 491 aaPredicted RBP20.52■□□□□ 0.87
CXXC4-201ENST00000394767 PARD3BQ8TEW8 1205 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 RBM41Q96IZ5 413 aaKnown RBP20.52■□□□□ 0.87
CXXC4-201ENST00000394767 EHD2Q9NZN4 543 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 LCMT1Q9UIC8 334 aa20.52■□□□□ 0.87
CXXC4-201ENST00000394767 GUCY2FP51841 1108 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 ELAVL2Q12926 359 aaKnown RBP20.51■□□□□ 0.87
CXXC4-201ENST00000394767 HEY1Q9Y5J3 304 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 B4GALT5O43286 388 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 IVLP07476 585 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 CC2D1AQ6P1N0 951 aaPredicted RBP20.51■□□□□ 0.87
CXXC4-201ENST00000394767 C1orf228Q6PIY5 440 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 TSC1Q92574 1164 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 DUSP9Q99956 384 aaKnown RBP20.51■□□□□ 0.87
CXXC4-201ENST00000394767 MRPL9Q9BYD2 267 aaKnown RBP20.51■□□□□ 0.87
CXXC4-201ENST00000394767 MAD1L1Q9Y6D9 718 aa20.51■□□□□ 0.87
CXXC4-201ENST00000394767 COL1A2P08123 1366 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms