RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CCDC137Q6PK04 289 aaKnown RBP20■□□□□ 0.79
HOXC6-202ENST00000394331 AAASQ9NRG9 546 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 PCDHAC2Q9Y5I4 1007 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 ADAMTSL1Q8N6G6 1762 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 XRCC5P13010 732 aaKnown RBP20■□□□□ 0.79
HOXC6-202ENST00000394331 LMNB1P20700 586 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 CALCOCO2Q13137 446 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 TAF1BQ53T94 588 aaPredicted RBP20■□□□□ 0.79
HOXC6-202ENST00000394331 FAM47EQ6ZV65 393 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 KRT27Q7Z3Y8 459 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 KBTBD2Q8IY47 623 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 C12orf50Q8NA57 414 aaPredicted RBP20■□□□□ 0.79
HOXC6-202ENST00000394331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20■□□□□ 0.79
HOXC6-202ENST00000394331 CATSPER2Q96P56 530 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 TUBGCP5Q96RT8 1024 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 SMC6Q96SB8 1091 aa20■□□□□ 0.79
HOXC6-202ENST00000394331 TYW1Q9NV66 732 aaKnown RBP20■□□□□ 0.79
HOXC6-202ENST00000394331 MSH4O15457 936 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 TBCAO75347 108 aaKnown RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 CYP3A4P08684 503 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 UBTFL6P0CB48 400 aaPredicted RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 ZNF76P36508 570 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 WDR4P57081 412 aaKnown RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 SNAP25P60880 206 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 NR1H3Q13133 447 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 TMED1Q13445 227 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 RHBDF2Q6PJF5 856 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 CCDC125Q86Z20 511 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 EURLQ9NYK6 297 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 PTTG2Q9NZH5 202 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 GDF11O95390 407 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 PDK4Q16654 411 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 EXOC3L4Q17RC7 722 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 RBM26Q5T8P6 1007 aaKnown RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 SPATA24Q86W54 205 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 ZNF653Q96CK0 615 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 OSGEPQ9NPF4 335 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 SYNPO2Q9UMS6 1093 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 F8W8V4 182 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 SLC16A3O15427 465 aaKnown RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 GSC2O15499 205 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 PRPF4O43172 522 aaKnown RBP eCLIP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 VAV1P15498 845 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 CRABP2P29373 138 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 DSG1Q02413 1049 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 CCDC174Q6PII3 467 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 CLNKQ7Z7G1 428 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 ZBTB8BQ8NAP8 495 aaPredicted RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 OLIG1Q8TAK6 271 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 ALG3Q92685 438 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 DDX27Q96GQ7 796 aaKnown RBP19.99■□□□□ 0.79
HOXC6-202ENST00000394331 VAV3Q9UKW4 847 aa19.99■□□□□ 0.79
HOXC6-202ENST00000394331 PIK3CDO00329 1044 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 ENTPD3O75355 529 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 YY1P25490 414 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 HPCAP84074 193 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 TCEAL1Q15170 157 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 C11orf63Q6NUN7 778 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 ALDH16A1Q8IZ83 802 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 SMYD1Q8NB12 490 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 U2AF1L4Q8WU68 220 aaKnown RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 QTRT2Q9H974 415 aaKnown RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 TMEM165Q9HC07 324 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 HNRNPRO43390 633 aaKnown RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 MMP10P09238 476 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 IDO1P14902 403 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 GAP43P17677 238 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 PON1P27169 355 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 HOXD13P35453 343 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 COILP38432 576 aaPredicted RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 RGS2P41220 211 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 ADAT2Q7Z6V5 191 aaKnown RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 UBL4BQ8N7F7 174 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 DENND1AQ8TEH3 1009 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 PTCD3Q96EY7 689 aaKnown RBP19.98■□□□□ 0.79
HOXC6-202ENST00000394331 BHMT2Q9H2M3 363 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 RABGAP1Q9Y3P9 1069 aa19.98■□□□□ 0.79
HOXC6-202ENST00000394331 ACSL3O95573 720 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 PHEXP78562 749 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 HNRNPDQ14103 355 aaKnown RBP19.97■□□□□ 0.79
HOXC6-202ENST00000394331 SPARCL1Q14515 664 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 ACAD11Q709F0 780 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 EIF2AK1Q9BQI3 630 aaKnown RBP19.97■□□□□ 0.79
HOXC6-202ENST00000394331 PCDH18Q9HCL0 1135 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 ETNK2Q9NVF9 386 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 NR3C1P04150 777 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 SPATA31D3P0C874 917 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 ACTN1P12814 892 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 SLC9A1P19634 815 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 GRM2Q14416 872 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 R3HDM1Q15032 1099 aaKnown RBP19.97■□□□□ 0.79
HOXC6-202ENST00000394331 SPATA31D4Q6ZUB0 917 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 DNAAF5Q86Y56 855 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 NRXN2Q9P2S2 1712 aa19.97■□□□□ 0.79
HOXC6-202ENST00000394331 GH2P01242 217 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 CYP4A11Q02928 519 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 CAV1Q03135 178 aa19.96■□□□□ 0.79
HOXC6-202ENST00000394331 ZNF211Q13398 564 aaPredicted RBP19.96■□□□□ 0.79
HOXC6-202ENST00000394331 MIGA2Q7L4E1 593 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms