RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 KLHL32Q96NJ5 620 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 APOL2Q9BQE5 337 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 GPHNQ9NQX3 736 aaPredicted RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 GTSE1Q9NYZ3 720 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 SPATA7Q9P0W8 599 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 PLXNC1O60486 1568 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 FAM47DPA6NHR8 397 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 AKAP10O43572 662 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 LDHAP00338 332 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 CCDC130P13994 396 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 LRRC17Q8N6Y2 441 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 C12orf50Q8NA57 414 aaPredicted RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 ARL5BQ96KC2 179 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 ATP5BP06576 529 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 RGS7P49802 495 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 POLGP54098 1239 aaPredicted RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 CACNA2D1P54289 1103 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 MCCD1P59942 119 aaPredicted RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 KRT31Q15323 416 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 TRIP10Q15642 601 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 CHURC1Q8WUH1 139 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 NDST4Q9H3R1 872 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 PDS5AQ29RF7 1337 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 A0A1W2PQ72 361 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 GPC5P78333 572 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 LIN54Q6MZP7 749 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 FBXO42Q6P3S6 717 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 EFL1Q7Z2Z2 1120 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 TBC1D19Q8N5T2 526 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 AURKCQ9UQB9 309 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 PCDHGA11Q9Y5H2 935 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 FHOD1Q9Y613 1164 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 KDRP35968 1356 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 TPPPO94811 219 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 FDPSP14324 419 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 SERPINB9P50453 376 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 TOP3AQ13472 1001 aaPredicted RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 C1DQ13901 141 aaKnown RBP9.47□□□□□ -0.89
CHD2-201ENST00000394196 CCDC58Q4VC31 144 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 ACCSQ96QU6 501 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 TEKT3Q9BXF9 490 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 HDAC6Q9UBN7 1215 aa9.47□□□□□ -0.89
CHD2-201ENST00000394196 FTCDO95954 541 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 ORC2Q13416 577 aaPredicted RBP9.46□□□□□ -0.89
CHD2-201ENST00000394196 KYNUQ16719 465 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 HMBOX1Q6NT76 420 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 C1orf228Q6PIY5 440 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 C1orf131Q8NDD1 294 aaKnown RBP9.46□□□□□ -0.89
CHD2-201ENST00000394196 FNIP1Q8TF40 1166 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 CYFIP2Q96F07 1278 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 MAP10Q9P2G4 905 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 ZNF221Q9UK13 617 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 UBE2QL1A1L167 161 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 B3GALNT1O75752 331 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 FAM228BP0C875 321 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 SOX5P35711 763 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 PRMT1Q99873 361 aaKnown RBP9.46□□□□□ -0.89
CHD2-201ENST00000394196 SH3BP1Q9Y3L3 701 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 A0A087WXM4 84 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 LRRC74AQ0VAA2 488 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 TCEAL5Q5H9L2 206 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 SPERTQ8NA61 448 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 KLHL11Q9NVR0 708 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 ANAPC7Q9UJX3 599 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.89
CHD2-201ENST00000394196 ZBED4O75132 1171 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 CIITAP33076 1130 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 MIS18BP1Q6P0N0 1132 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 CAMK1DQ8IU85 385 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 CCNYQ8ND76 341 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 TRIM54Q9BYV2 358 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 SLC39A2Q9NP94 309 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 C2CD2Q9Y426 696 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 A0A1W2PQC6 194 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 PALMO75781 387 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 GFPT2O94808 682 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 ANKRD13CQ8N6S4 541 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 FANCBQ8NB91 859 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 CLP1Q92989 425 aaKnown RBP9.46□□□□□ -0.9
CHD2-201ENST00000394196 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 USE1Q9NZ43 259 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 CRNNQ9UBG3 495 aaPredicted RBP9.46□□□□□ -0.9
CHD2-201ENST00000394196 SFI1A8K8P3 1242 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
CHD2-201ENST00000394196 AP1S1P61966 158 aa9.46□□□□□ -0.9
CHD2-201ENST00000394196 COTL1Q14019 142 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms