RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CHURC1Q8WUH1 139 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 WDR18Q9BV38 432 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 FSCN2O14926 492 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 ALAS1P13196 640 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 PTK6Q13882 451 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 SYCP2LQ5T4T6 812 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TTC25Q96NG3 672 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 UBE4BO95155 1302 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TCP10L2B9ZVM9 353 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 CAPN9O14815 690 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 AP1G2O75843 785 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 BASP1P80723 227 aaKnown RBP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 LENG9Q96B70 501 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 TTC1Q99614 292 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 HEY2Q9UBP5 337 aa12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
R3HDM2-203ENST00000393811 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 DPPA5A6NC42 116 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 I3L4J1 428 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 TXNDC9O14530 226 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 P4HA2O15460 535 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 SMNDC1O75940 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 RFC5P40937 340 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 BPIFB4P59827 614 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ALCAMQ13740 583 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ZNF394Q53GI3 561 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 KREMEN1Q96MU8 473 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ZMYM2Q9UBW7 1377 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CCDC22O60826 627 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 TJP3O95049 919 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 BORCS6Q96GS4 357 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CHKBQ9Y259 395 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 EME2A4GXA9 379 aaPredicted RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 INHBAP08476 426 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 ETS1P14921 441 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 CHRNB2P17787 502 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 KCNA3P22001 575 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 SLC1A1P43005 524 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 LIG4P49917 911 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 FAM71AQ8IYT1 594 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 PPARGC1AQ9UBK2 798 aaKnown RBP12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 NENFQ9UMX5 172 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 PCDHAC2Q9Y5I4 1007 aa12.48□□□□□ -0.41
R3HDM2-203ENST00000393811 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CYP1A2P05177 515 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 UBTFL6P0CB48 400 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CETPP11597 493 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 PTPN4P29074 926 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 QARSP47897 775 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CENPCQ03188 943 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 GALNTL6Q49A17 601 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 SENP1Q9P0U3 644 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CCDC189A1A4V9 331 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 OPHN1O60890 802 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 ZWINTO95229 277 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 KITP10721 976 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 PECAM1P16284 738 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 VHLP40337 213 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 ECE1P42892 770 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 HIF1AQ16665 826 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 SNX30Q5VWJ9 437 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 RIBC1Q8N443 379 aaPredicted RBP12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 FGD4Q96M96 766 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 ZWILCHQ9H900 591 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 STARD13Q9Y3M8 1113 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 COL4A1P02462 1669 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 CLRN2A0PK11 232 aa12.47□□□□□ -0.41
R3HDM2-203ENST00000393811 ZBED4O75132 1171 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms