RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MAN2B1O00754 1011 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ZNF197O14709 1029 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 SDHBP21912 280 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 CCT6AP40227 531 aaKnown RBP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 NPTX2P47972 431 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 EPHA5P54756 1037 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ARPP19P56211 112 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ARHGAP8P85298 464 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ZNF174Q15697 407 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 TPGS2Q68CL5 300 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 MAMSTRQ6ZN01 415 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 HS6ST3Q8IZP7 471 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ZSWIM3Q96MP5 696 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 TRMT61BQ9BVS5 477 aaKnown RBP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 ZNF334Q9HCZ1 680 aaPredicted RBP16.84■□□□□ 0.29
CHMP3-202ENST00000393773 TRPV5Q9NQA5 729 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 CEP72Q9P209 647 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 USP18Q9UMW8 372 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 PIAS3Q9Y6X2 628 aa16.84■□□□□ 0.29
CHMP3-202ENST00000393773 H7C4K7 107 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 MCF2P10911 925 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 TCHHQ07283 1943 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 ZNF280DQ6N043 979 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 C4orf32Q8N8J7 132 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 DEPDC1BQ8WUY9 529 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 SMARCD2Q92925 531 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 IRF7Q92985 503 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 SUSD3Q96L08 255 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
CHMP3-202ENST00000393773 MRPL4Q9BYD3 311 aaKnown RBP16.83■□□□□ 0.28
CHMP3-202ENST00000393773 TMEM134Q9H6X4 195 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 TRPV4Q9HBA0 871 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 DDX19AQ9NUU7 478 aaKnown RBP16.83■□□□□ 0.28
CHMP3-202ENST00000393773 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 LAMA1P25391 3075 aa16.83■□□□□ 0.28
CHMP3-202ENST00000393773 KIAA1549LQ6ZVL6 1849 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 CCDC169A6NNP5 214 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 HIP1RO75146 1068 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 PSMC3P17980 439 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 GDI1P31150 447 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 RPL9P32969 192 aaKnown RBP16.82■□□□□ 0.28
CHMP3-202ENST00000393773 PEX3P56589 373 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 TWF1Q12792 350 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 MAPK7Q13164 816 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHMP3-202ENST00000393773 CTXN3Q4LDR2 81 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 MPZL3Q6UWV2 235 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 FAM3CQ92520 227 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 RTKNQ9BST9 563 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
CHMP3-202ENST00000393773 AFF4Q9UHB7 1163 aaKnown RBP16.82■□□□□ 0.28
CHMP3-202ENST00000393773 KIAA1024Q9UPX6 916 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 NUB1Q9Y5A7 615 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 CFAP47Q6ZTR5 3102 aa16.82■□□□□ 0.28
CHMP3-202ENST00000393773 VNN2O95498 520 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 GJA1P17302 382 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 MCM4P33991 863 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 VIPR2P41587 438 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 CCR3P51677 355 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 NRLP54845 237 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 DMP1Q13316 513 aaPredicted RBP16.81■□□□□ 0.28
CHMP3-202ENST00000393773 GAS6Q14393 721 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 NBR1Q14596 966 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 LPAL2Q16609 132 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 WDR44Q5JSH3 913 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 CYP4A22Q5TCH4 519 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 LAIR1Q6GTX8 287 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 RNF19BQ6ZMZ0 732 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 TMEM130Q8N3G9 435 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 LEMD2Q8NC56 503 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 BEST2Q8NFU1 509 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 SHKBP1Q8TBC3 707 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
CHMP3-202ENST00000393773 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 DDX12PQ92771 950 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 TBC1D32Q96NH3 1257 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 RUSC1Q9BVN2 902 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 LRWD1Q9UFC0 647 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 YIPF1Q9Y548 306 aa16.81■□□□□ 0.28
CHMP3-202ENST00000393773 MYO16Q9Y6X6 1858 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 E9PMD0 336 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 KRT37O76014 449 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 CHRNB1P11230 501 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 MYL4P12829 197 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 SATB1Q01826 763 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 TEAD2Q15562 447 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 TMC8Q8IU68 726 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 ELMOD1Q8N336 334 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 ACAP3Q96P50 834 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms