RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 PROB1E7EW31 1015 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 H0YCG3 227 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 K7ENM7 598 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 HNRNPDLO14979 420 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 TRAK2O60296 914 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 FAM13AO94988 1023 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 RHOP08100 348 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 NMT1P30419 496 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 LRPAP1P30533 357 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 MCM4P33991 863 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 MATR3P43243 847 aaKnown RBP eCLIP19.88■□□□□ 0.775e-11■■■□□ 18.9
PDLIM7-205ENST00000393551 GUCY2FP51841 1108 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 TCEAL8Q8IYN2 117 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 DTWD2Q8NBA8 298 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 ING5Q8WYH8 240 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 TBC1D17Q9HA65 648 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 KCNH3Q9ULD8 1083 aa19.88■□□□□ 0.77
PDLIM7-205ENST00000393551 FAM186AA6NE01 2351 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 CACNA1IQ9P0X4 2223 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 A0A0B4J269 797 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 TISP43B9A030 160 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 ANKRD63C9JTQ0 380 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 M0QZQ0 153 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 DDIT3P35638 169 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 NBL1P41271 181 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 AARSP49588 968 aaKnown RBP eCLIP19.87■□□□□ 0.774e-9■■□□□ 11.9
PDLIM7-205ENST00000393551 LIG4P49917 911 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 GTF2BQ00403 316 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 RESTQ13127 1097 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 CTXN3Q4LDR2 81 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 LARP4BQ92615 738 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 KIF12Q96FN5 646 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 IKZF4Q9H2S9 585 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 AVENQ9NQS1 362 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 ARHGEF3Q9NR81 526 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 FBXO2Q9UK22 296 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 PCDHB8Q9UN66 801 aa19.87■□□□□ 0.77
PDLIM7-205ENST00000393551 SCN1AP35498 2009 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 H7C4K7 107 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 PPEF2O14830 753 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 OGTO15294 1046 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 GFRA3O60609 400 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 VNN2O95498 520 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CEBPBP17676 345 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CYP3A5P20815 502 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 SYT1P21579 422 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 MARCKSP29966 332 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CCR2P41597 374 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 ZC2HC1CQ53FD0 456 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 PRSS36Q5K4E3 855 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 ASCL5Q7RTU5 278 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 MAP4K3Q8IVH8 894 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 TCEAL4Q96EI5 215 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CLIC6Q96NY7 704 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 KXD1Q9BQD3 176 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 PLA2G2FQ9BZM2 168 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CYP4F11Q9HBI6 524 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 DLGAP2Q9P1A6 1054 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 CPSF3Q9UKF6 684 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 UBQLN1Q9UMX0 589 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 MRPS23Q9Y3D9 190 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 TIMM13Q9Y5L4 95 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 INSL5Q9Y5Q6 135 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 SPTBN4Q9H254 2564 aa19.86■□□□□ 0.77
PDLIM7-205ENST00000393551 PRRG1O14668 218 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 OAZ2O95190 189 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 GLULP15104 373 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 PTPN2P17706 415 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 PPP2R3AQ06190 1150 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 ANGPT1Q15389 498 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 TPGS2Q68CL5 300 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 ZNF280DQ6N043 979 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 PHLDB3Q6NSJ2 640 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 RNF19BQ6ZMZ0 732 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 MTSS1LQ765P7 747 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 APPL2Q8NEU8 664 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 MCRS1Q96EZ8 462 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 MSTO1Q9BUK6 570 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 ZHX3Q9H4I2 956 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 CEP72Q9P209 647 aa19.85■□□□□ 0.77
PDLIM7-205ENST00000393551 ZNF292O60281 2723 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 TSC2P49815 1807 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 STK25O00506 426 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 LRG1P02750 347 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 KRT18P05783 430 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 DCNP07585 359 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 SCP2P22307 547 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 ELF1P32519 619 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 STARD6P59095 220 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 ADCY1Q08828 1119 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 FRMD5Q7Z6J6 570 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 BEST2Q8NFU1 509 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 RASSF8Q8NHQ8 419 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 CORO1BQ9BR76 489 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 FOXQ1Q9C009 403 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 CRISPLD1Q9H336 500 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 ST6GALNAC4Q9H4F1 302 aa19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 RPF1Q9H9Y2 349 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 AFF4Q9UHB7 1163 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-205ENST00000393551 SRPRBQ9Y5M8 271 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms