RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
RFC4-202ENST00000392481 RHOBTB2Q9BYZ6 727 aa12.85□□□□□ -0.35
RFC4-202ENST00000392481 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
RFC4-202ENST00000392481 C2CD2Q9Y426 696 aa12.85□□□□□ -0.35
RFC4-202ENST00000392481 BACE2Q9Y5Z0 518 aa12.85□□□□□ -0.35
RFC4-202ENST00000392481 ANK1P16157 1881 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
RFC4-202ENST00000392481 ADAM12O43184 909 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 EXTL3O43909 919 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 PAPLNO95428 1278 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 MYL1P05976 194 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 NFICP08651 508 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 WEE2P0C1S8 567 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 PAX3P23760 479 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 MCM4P33991 863 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 OR1D2P34982 312 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 HOXD13P35453 343 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFC4-202ENST00000392481 NDUFA8P51970 172 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 RAB33AQ14088 237 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
RFC4-202ENST00000392481 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 KREMEN2Q8NCW0 462 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 APPL2Q8NEU8 664 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■■□□□ 13.8
RFC4-202ENST00000392481 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 FAM213AQ9BRX8 229 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 POMKQ9H5K3 350 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 UBE4BO95155 1302 aa12.84□□□□□ -0.35
RFC4-202ENST00000392481 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 H7C4K7 107 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 M0QZQ0 153 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 GUCY2FP51841 1108 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
RFC4-202ENST00000392481 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
RFC4-202ENST00000392481 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 RNF135Q8IUD6 432 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 SAAL1Q96ER3 474 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
RFC4-202ENST00000392481 ANO9A1A5B4 782 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 KLRC4O43908 158 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 RFPL2O75678 378 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 ZMYND10O75800 440 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 ALADP13716 330 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 LILRA4P59901 499 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 SNRPFP62306 86 aaKnown RBP12.82□□□□□ -0.36
RFC4-202ENST00000392481 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 LIN9Q5TKA1 542 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 SLC8B1Q6J4K2 584 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 GPD1LQ8N335 351 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 TMEM130Q8N3G9 435 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 ZSWIM2Q8NEG5 633 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 PCIF1Q9H4Z3 704 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 SLC39A2Q9NP94 309 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 RBAKQ9NYW8 714 aaPredicted RBP12.82□□□□□ -0.36
RFC4-202ENST00000392481 USTQ9Y2C2 406 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 CDY1Q9Y6F8 540 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 C2orf16Q68DN1 1984 aa12.82□□□□□ -0.36
RFC4-202ENST00000392481 GOLGA8IPA6NC78 632 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 GOLGA8JA6NMD2 632 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 PIRO00625 290 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 TGFB1I1O43294 461 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 DCXO43602 365 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 OAZ2O95190 189 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
RFC4-202ENST00000392481 PSMD2Q13200 908 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 CTXN3Q4LDR2 81 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 CCDC149Q6ZUS6 474 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 EFCAB13Q8IY85 973 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 FEZF2Q8TBJ5 459 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
RFC4-202ENST00000392481 ZNF707Q96C28 371 aaPredicted RBP12.81□□□□□ -0.36
RFC4-202ENST00000392481 C1QTNF1Q9BXJ1 281 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 GOLPH3LQ9H4A5 285 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
RFC4-202ENST00000392481 CGNQ9P2M7 1197 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms