RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 V9GYQ6 96 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 TRAPPC8Q9Y2L5 1435 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 MIF4GDA9UHW6 222 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 IL13P35225 146 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 TAF5Q15542 800 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 ZBTB38Q8NAP3 1195 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 TRABDQ9H4I3 376 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 VTA1Q9NP79 307 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
SMARCA2-209ENST00000382203 ATP9AO75110 1047 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 FYNP06241 537 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PSMB9P28065 219 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 HSPA2P54652 639 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 CHRNDQ07001 517 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF658Q5TYW1 1059 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 CCDC115Q96NT0 180 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 XPO6Q96QU8 1125 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 EHD3Q9NZN3 535 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 CLIC4Q9Y696 253 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 BLMP54132 1417 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 MFAP3LO75121 409 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 STXBP2Q15833 593 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 RWDD4Q6NW29 188 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PDCD6IPQ8WUM4 868 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 NXF1Q9UBU9 619 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 SPEF1Q9Y4P9 236 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 BNIP3LO60238 219 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 GTF2H1P32780 548 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PDIA2Q13087 525 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 HSPH1Q92598 858 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ROGDIQ9GZN7 287 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 C12orf4Q9NQ89 552 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PSD3Q9NYI0 1048 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PHGDHO43175 533 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 LSP1P33241 339 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 UBXN2AP68543 259 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 BNC1Q01954 994 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 SETD3Q86TU7 594 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 CLVS1Q8IUQ0 354 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ZBED8Q8IZ13 594 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 CLHC1Q8NHS4 586 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 SKA1Q96BD8 255 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ENTPD7Q9NQZ7 604 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 GCNT4Q9P109 453 aa12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF23P17027 643 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 CENPAP49450 140 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 DDI2Q5TDH0 399 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 LRRC6Q86X45 466 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 SH2D3CQ8N5H7 860 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 SARS2Q9NP81 518 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 HPCAL4Q9UM19 191 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 XDHP47989 1333 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 PALMO75781 387 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 CTNNAL1Q9UBT7 734 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 PFDN2Q9UHV9 154 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 MYL1P05976 194 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 ITGA3P26006 1051 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 C1DQ13901 141 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 C5orf22Q49AR2 442 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 PIGOQ8TEQ8 1089 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 TBATAQ96M53 351 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 MAGEB5Q9BZ81 275 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 GCOM2Q9BZD3 368 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 EHD1Q9H4M9 534 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 FAM58BPP0C7Q3 252 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 STAT5AP42229 794 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 STAT5BP51692 787 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 ITGA1P56199 1179 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 STAT4Q14765 748 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 XPO7Q9UIA9 1087 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 ZNF804BA4D1E1 1349 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 E5RI56 91 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 MYL3P08590 195 aa12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 FEN1P39748 380 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-209ENST00000382203 GTF2H3Q13889 308 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms