RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 PPP1R2P1Q96PQ5 205 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 MARCOQ9UEW3 520 aaPredicted RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 FEM1BQ9UK73 627 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 NEMP1O14524 444 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 TDP2O95551 362 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 CCNA1P78396 465 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 GPBP1L1Q9HC44 474 aaPredicted RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 DDX20Q9UHI6 824 aaKnown RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 C15orf41Q9Y2V0 281 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 IQGAP3Q86VI3 1631 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 EIF3DO15371 548 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZBTB24O43167 697 aaPredicted RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 CYP2D6P10635 497 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 KLRC1P26715 233 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 EPHA7Q15375 998 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 SCFD1Q8WVM8 642 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 CAAP1Q9H8G2 361 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 TET3O43151 1660 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 PSMC5P62195 406 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 DNAJC3Q13217 504 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 LXNQ9BS40 222 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 RARGP13631 454 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 COPB2P35606 906 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 BTKQ06187 659 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 LBRQ14739 615 aaKnown RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRAPPC9Q96Q05 1148 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 DHX35Q9H5Z1 703 aaKnown RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 DIABLOQ9NR28 239 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 ATP9AO75110 1047 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 APOA4P06727 396 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 RNF217Q8TC41 542 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 TUBGCP3Q96CW5 907 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 TAGLN3Q9UI15 199 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CDV3Q9UKY7 258 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CCDC78A2IDD5 438 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 ATP6V1B1P15313 513 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 PLAGL2Q9UPG8 496 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 ALG6Q9Y672 507 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZNF839A8K0R7 811 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CLPTM1O96005 669 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 PHKA2P46019 1235 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 KLHDC7AQ5VTJ3 777 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 EFL1Q7Z2Z2 1120 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 THNSL1Q8IYQ7 743 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 BEST2Q8NFU1 509 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 OPTNQ96CV9 577 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 POLD4Q9HCU8 107 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 ETAA1Q9NY74 926 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 HEY2Q9UBP5 337 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 FAM153AQ9UHL3 310 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CNOT7Q9UIV1 285 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 FNDC3AQ9Y2H6 1198 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 NMT2O60551 498 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 ALBP02768 609 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CLK1P49759 484 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CACNA2D1P54289 1103 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 R3HDM1Q15032 1099 aaKnown RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 PGBD4Q96DM1 585 aa17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 TOPORSQ9NS56 1045 aaPredicted RBP17.91■□□□□ 0.46
COL4A3BP-203ENST00000380494 CDC42BPBQ9Y5S2 1711 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L15C9J2P7 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L13C9JLJ4 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L11C9JVI0 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L18D6R9N7 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L22D6RA61 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L17D6RBQ6 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L19D6RCP7 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L20D6RJB6 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 STAT3P40763 770 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L24Q0WX57 530 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 STILQ15468 1287 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRMT5Q32P41 509 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L6PQ6QN14 398 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 DSTYKQ6XUX3 929 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 PARD3BQ8TEW8 1205 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 OTUB1Q96FW1 271 aaPredicted RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZFRQ96KR1 1074 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 MRPL4Q9BYD3 311 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 TBX3O15119 743 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 RASSF9O75901 435 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP1O94782 785 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 THRAP10827 490 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZNF568Q3ZCX4 644 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 YTHDF3Q7Z739 585 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 LUZP2Q86TE4 346 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 SRBD1Q8N5C6 995 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 RBAKQ9NYW8 714 aaPredicted RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 LRCH1Q9Y2L9 728 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 METP08581 1390 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ERFP50548 548 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 STX5Q13190 355 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ATXN2LQ8WWM7 1075 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms