RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 FAM136AQ96C01 138 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 BICD1Q96G01 975 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
HERC6-203ENST00000380265 ACTL7BQ9Y614 415 aa12.88□□□□□ -0.35
HERC6-203ENST00000380265 NUP98P52948 1817 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 B2RBV5 119 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 SORBS3O60504 671 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 PPP4CP60510 307 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 KDSRQ06136 332 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 PDIA2Q13087 525 aaKnown RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 GPS1Q13098 491 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
HERC6-203ENST00000380265 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 BRINP3Q76B58 766 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 RHBDL2Q9NX52 303 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 A0A1B0GUL6 1792 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 C2CD2LO14523 706 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 PYGBP11216 843 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 OCRLQ01968 901 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 MAPK6Q16659 721 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 BMT2Q1RMZ1 405 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 DMAP1Q9NPF5 467 aaPredicted RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 SAR1AQ9NR31 198 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 NDE1Q9NXR1 346 aa12.87□□□□□ -0.35
HERC6-203ENST00000380265 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.87□□□□□ -0.35
HERC6-203ENST00000380265 TP73O15350 636 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 BANF1O75531 89 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 LYNP07948 512 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 AMPD1P23109 780 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 SCNN1BP51168 640 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 SYDE1Q6ZW31 735 aaPredicted RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 PRR11Q96HE9 360 aaPredicted RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 FRMPD4Q14CM0 1322 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 COL18A1P39060 1754 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ARHGEF35A5YM69 484 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ARHGAP42A6NI28 874 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 MSH4O15457 936 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 IVDP26440 423 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 AP1B1Q10567 949 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 TTC7BQ86TV6 843 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ST13P4Q8IZP2 240 aaPredicted RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 SNED1Q8TER0 1413 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 CD101Q93033 1021 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 OLFML3Q9NRN5 406 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 UVRAGQ9P2Y5 699 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ZBTB21Q9ULJ3 1066 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 LRP5O75197 1615 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 USP1O94782 785 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 ARSEP51690 589 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 CNPY1Q3B7I2 92 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 PLEKHG4Q58EX7 1191 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 HIPK4Q8NE63 616 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 CPA5Q8WXQ8 436 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 DHX38Q92620 1227 aaKnown RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 SH2D3AQ9BRG2 576 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 MANSC1Q9H8J5 431 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
HERC6-203ENST00000380265 IKBKGQ9Y6K9 419 aa12.86□□□□□ -0.35
HERC6-203ENST00000380265 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
HERC6-203ENST00000380265 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ETS1P14921 441 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 YY1P25490 414 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 MFAP3P55082 362 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TRIM74Q86UV6 250 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TRIM73Q86UV7 250 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 NMD3Q96D46 503 aaKnown RBP12.85□□□□□ -0.35
HERC6-203ENST00000380265 DTNBP1Q96EV8 351 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
HERC6-203ENST00000380265 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms