RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ARL8AQ96BM9 186 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 CCDC43Q96MW1 224 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ZIM3Q96PE6 472 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 RSPH10B2B2RC85 870 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 KIAA0391O15091 583 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 RSPH10BP0C881 870 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 SLC9A1P19634 815 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 HSPA9P38646 679 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 CARSP49589 748 aaKnown RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 IRAK1P51617 712 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 BEX3Q00994 111 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 PTK7Q13308 1070 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TFDP1Q14186 410 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TCEAL1Q15170 157 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 UAP1Q16222 522 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 C10orf76Q5T2E6 689 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 LMO3Q8TAP4 145 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 POLR3FQ9H1D9 316 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 ACBD3Q9H3P7 528 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 NLRC4Q9NPP4 1024 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
CDKL5-202ENST00000379996 TTC7AQ9ULT0 858 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-202ENST00000379996 A0A1W2PQ45 241 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 A0A1W2PQY0 241 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TMEM150BA6NC51 233 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 GOLGA6BA6NDN3 693 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 AKR1B10O60218 316 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 PHACTR2O75167 634 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 SGPL1O95470 568 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 KRT18P05783 430 aaKnown RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TMOD1P28289 359 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 CNGA1P29973 690 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 NPTX2P47972 431 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 SMTNP53814 917 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 SH3TC2Q8TF17 1288 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 PSPC1Q8WXF1 523 aaKnown RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 HES6Q96HZ4 224 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 IFT74Q96LB3 600 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 GDAP1L1Q96MZ0 367 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ADAMTS10Q9H324 1103 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 MROH7Q68CQ1 1323 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 KAT6AQ92794 2004 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 SORBS3O60504 671 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 PGK1P00558 417 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 USP46P62068 366 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 MRPS25P82663 173 aaKnown RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 MGAT3Q09327 533 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ADAM9Q13443 819 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TRIM71Q2Q1W2 868 aaKnown RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 HERC4Q5GLZ8 1057 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 DCAF12L1Q5VU92 463 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 BSNDQ8WZ55 320 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TYW1Q9NV66 732 aaKnown RBP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TBC1D7Q9P0N9 293 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 FKBPLQ9UIM3 349 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 KBTBD13C9JR72 458 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 GPR32O75388 356 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 CASP4P49662 377 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 LAMTOR4Q0VGL1 99 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 CAPSQ13938 189 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 NBPF20Q3BBV1 942 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ODR4Q5SWX8 454 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 FAM102BQ5T8I3 360 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 EFCAB12Q6NXP0 572 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 FAM178BQ8IXR5 827 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 KIAA0319LQ8IZA0 1049 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 MYCT1Q8N699 235 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 C7orf31Q8N865 590 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKL5-202ENST00000379996 ZBTB9Q96C00 473 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 NEUROG2Q9H2A3 272 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 FZD8Q9H461 694 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 EXOC7Q9UPT5 735 aa8.31□□□□□ -1.08
CDKL5-202ENST00000379996 RAD51CO43502 376 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 KIF4AO95239 1232 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 IPO7O95373 1038 aaKnown RBP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 FTCDO95954 541 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 CD4P01730 458 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 SSBP05455 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDKL5-202ENST00000379996 NR2F2P24468 414 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 PTENP60484 403 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 CFAP221Q4G0U5 840 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ZPBP2Q6X784 338 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 KDM7AQ6ZMT4 941 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
CDKL5-202ENST00000379996 ACCSQ96QU6 501 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms