RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RAVER1Q8IY67 606 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ANKRD42Q8N9B4 389 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ANKRD36BP1Q96IX9 119 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ZC3H12CQ9C0D7 883 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 NLRC4Q9NPP4 1024 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 STXBP5LQ9Y2K9 1186 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PCDHB6Q9Y5E3 794 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 SNX9Q9Y5X1 595 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 A0A1W2PQJ5 194 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 TBKBP1A7MCY6 615 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 FUCA1P04066 466 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 EEF1GP26641 437 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PMS1P54277 932 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MPP2Q14168 576 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 FASTKD5Q7L8L6 764 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 KRT25Q7Z3Z0 450 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 OSTM1Q86WC4 334 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MCF2L2Q86YR7 1114 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 IFNLR1Q8IU57 520 aaPredicted RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 EGLN2Q96KS0 407 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 TRIM31Q9BZY9 425 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 NT5C3AQ9H0P0 336 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MTUS1Q9ULD2 1270 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 HEMK1Q9Y5R4 338 aaPredicted RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 KCNK3O14649 394 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MAPK13O15264 365 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 EXOC3O60645 756 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MTRF1O75570 445 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 APOEP02649 317 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 HLA-DOAP06340 250 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PABPC1P11940 636 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ITGA4P13612 1032 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 RPL5P46777 297 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 CNGA3Q16281 694 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 WDR45BQ5MNZ6 344 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 GPATCH4Q5T3I0 446 aaKnown RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 STRIP1Q5VSL9 837 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 DDHD1Q8NEL9 900 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 SDR42E1Q8WUS8 393 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 TNFRSF25Q93038 417 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PHKBQ93100 1093 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 GRAMD1AQ96CP6 724 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
CDKL5-201ENST00000379989 TRIM51Q9BSJ1 452 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 LRRC27Q9C0I9 530 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 VTA1Q9NP79 307 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ZDHHC18Q9NUE0 388 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 MRGBPQ9NV56 204 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 ANGPTL2Q9UKU9 493 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 DMTF1Q9Y222 760 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 GDAQ9Y2T3 454 aa7.91□□□□□ -1.14
CDKL5-201ENST00000379989 NOTOA8MTQ0 251 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 UBE2Q2LH0YL09 131 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TSPY3P0CV98 308 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TSPY8P0CW00 308 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 BDNFP23560 247 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PRDX5P30044 214 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 STT3AP46977 705 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 HSD17B4P51659 736 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ATP2C1P98194 919 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 THOC5Q13769 683 aaKnown RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 CRY1Q16526 586 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ASTE1Q2TB18 679 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 FIGNQ5HY92 759 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 SPOPLQ6IQ16 392 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 FAM117BQ6P1L5 589 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ELMSAN1Q6PJG2 1045 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PHLDB2Q86SQ0 1253 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 VPS36Q86VN1 386 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 SPERTQ8NA61 448 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PPP1R14CQ8TAE6 165 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PPP4R1Q8TF05 950 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 U2AF1L4Q8WU68 220 aaKnown RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 USP6NLQ92738 828 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PRPF18Q99633 342 aaKnown RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ERP44Q9BS26 406 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TMEM109Q9BVC6 243 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 SENP6Q9GZR1 1112 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 STMN4Q9H169 189 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PLGRKTQ9HBL7 147 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TRNAU1APQ9NX07 287 aaKnown RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PCDHA4Q9UN74 947 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 KIF13BQ9NQT8 1826 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF536O15090 1300 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 RPTORQ8N122 1335 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 CES2O00748 559 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 EPHB6O15197 1021 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 GSC2O15499 205 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ANPEPP15144 967 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 PTPN2P17706 415 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TAC1P20366 129 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 AMPD1P23109 780 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 ENTPD1P49961 510 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 KPNA1P52294 538 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 DYNLL1P63167 89 aaKnown RBP7.9□□□□□ -1.14
CDKL5-201ENST00000379989 TUBA1BP68363 451 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 WASHC5Q12768 1159 aa7.9□□□□□ -1.14
CDKL5-201ENST00000379989 MED21Q13503 144 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms