RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PSMA4P25789 261 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SDC4P31431 198 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SULT1E1P49888 294 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 DSG4Q86SJ6 1040 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SLC13A5Q86YT5 568 aaPredicted RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 PABPC5Q96DU9 382 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 FAM213AQ9BRX8 229 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 CCDC22O60826 627 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 KLHL12Q53G59 568 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 APOL1O14791 398 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 ACADMP11310 421 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SFR1Q86XK3 245 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 TBCKQ8TEA7 893 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 RABGGTAQ92696 567 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 THUMPD3Q9BV44 507 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 XPO7Q9UIA9 1087 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 TNKSO95271 1327 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 CCT3P49368 545 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 AHCYL2Q96HN2 611 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 A8MXQ7 604 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 IL6P05231 212 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 CDC25AP30304 524 aa13.9□□□□□ -0.18
HIPK3-202ENST00000379016 HSPA9P38646 679 aaKnown RBP13.9□□□□□ -0.18
HIPK3-202ENST00000379016 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.19
HIPK3-202ENST00000379016 CHRM3P20309 590 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 PHKA2P46019 1235 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 PLA2G4AP47712 749 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 HSD17B4P51659 736 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 TASP1Q9H6P5 420 aa13.9□□□□□ -0.19
HIPK3-202ENST00000379016 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 SRP72O76094 671 aaKnown RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 OR6A2O95222 327 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CLTBP09497 229 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CACNB3P54284 484 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CTSWP56202 376 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TRIQKQ629K1 86 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TRIM24O15164 1050 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 IDH3BO43837 385 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 ZNF500O60304 480 aaPredicted RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PLA2G4BP0C869 781 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 LBPP18428 481 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 GCKRQ14397 625 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 NEK7Q8TDX7 302 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 ZNF512Q96ME7 567 aaPredicted RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 BHLHE41Q9C0J9 482 aaPredicted RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PIF1Q9H611 641 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CDYLQ9Y232 598 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CYP51A1Q16850 503 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 GALNT17Q6IS24 598 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 ERLEC1Q96DZ1 483 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 CENPXA8MT69 81 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 KCNQ3O43525 872 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PALMO75781 387 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
HIPK3-202ENST00000379016 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PCYOX1LQ8NBM8 494 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 A0A1W2PRG6 482 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TBX3O15119 743 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TFDP2Q14188 446 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 TRADDQ15628 312 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 RNF19BQ6ZMZ0 732 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 NUP85Q9BW27 656 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 OSGEPL1Q9H4B0 414 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 KCNH4Q9UQ05 1017 aa13.89□□□□□ -0.19
HIPK3-202ENST00000379016 PIK3CDO00329 1044 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 BTBD9Q96Q07 612 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 PAIP1Q9H074 479 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 SLC35C2Q9NQQ7 365 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 IPPQ9Y573 584 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 EIF3DO15371 548 aaKnown RBP eCLIP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 UMPSP11172 480 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 BMP3P12645 472 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 GNA15P30679 374 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 PTPN7P35236 360 aa13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 ZNF211Q13398 564 aaPredicted RBP13.88□□□□□ -0.19
HIPK3-202ENST00000379016 TSPAN14Q8NG11 270 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms