RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 NARSO43776 548 aaKnown RBP20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 TRAK2O60296 914 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 CXCL8P10145 99 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 SRFP11831 508 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 HARSP12081 509 aaKnown RBP20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 CYP3A5P20815 502 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 STAT6P42226 847 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 ME1P48163 572 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 KRT85P78386 507 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 CWF19L1Q69YN2 538 aaKnown RBP20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 GET4Q7L5D6 327 aaPredicted RBP20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 AVENQ9NQS1 362 aaPredicted RBP20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 CDH7Q9ULB5 785 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 KCNH3Q9ULD8 1083 aa20.6■□□□□ 0.89
TMEM88B-201ENST00000378821 H7C4K7 107 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 OGTO15294 1046 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 CCL16O15467 120 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 FAM13AO94988 1023 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 ATF2P15336 505 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 NTHL1P78549 312 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 ROR1Q01973 937 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 SLC39A4Q6P5W5 647 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 TCEAL8Q8IYN2 117 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 LEO1Q8WVC0 666 aaPredicted RBP20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 PHOX2BQ99453 314 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 SLC2A4RGQ9NR83 387 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 DNMT3BQ9UBC3 853 aaKnown RBP20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 TUBGCP4Q9UGJ1 667 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 MAFFQ9ULX9 164 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 ATP6V1DQ9Y5K8 247 aa20.59■□□□□ 0.89
TMEM88B-201ENST00000378821 WDR27A2RRH5 827 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 M0QZQ0 153 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 HNRNPDLO14979 420 aaKnown RBP20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 KRT18P05783 430 aaKnown RBP20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 AOC1P19801 751 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 TNFSF9P41273 254 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 AARSP49588 968 aaKnown RBP eCLIP20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 LIG4P49917 911 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 ENOX2Q16206 610 aaKnown RBP20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 E2F4Q16254 413 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 TPGS2Q68CL5 300 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 MAP4K3Q8IVH8 894 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 FGF13Q92913 245 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 BICD1Q96G01 975 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 SPATA32Q96LK8 384 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 MFSD1Q9H3U5 465 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 FBXL5Q9UKA1 691 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 NUB1Q9Y5A7 615 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 STYXL1Q9Y6J8 313 aa20.58■□□□□ 0.89
TMEM88B-201ENST00000378821 KRBA1A5PL33 1030 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 MYMKA6NI61 221 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 LACTBL1A8MY62 500 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 K7ENM7 598 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 NUCB2P80303 420 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 ZBTB41Q5SVQ8 909 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 RESP18Q5W5W9 173 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 SV2BQ7L1I2 683 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 DYMQ7RTS9 669 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 APPL2Q8NEU8 664 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 DDX12PQ92771 950 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 STRA6Q9BX79 667 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 HCFC1R1Q9NWW0 138 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 CPSF3Q9UKF6 684 aaKnown RBP20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 UBQLN1Q9UMX0 589 aaKnown RBP20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 PCDHB8Q9UN66 801 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 NUMBLQ9Y6R0 609 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 CACNA1HO95180 2353 aa20.57■□□□□ 0.88
TMEM88B-201ENST00000378821 TBCAO75347 108 aaKnown RBP20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 PPP1R37O75864 691 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 OAZ2O95190 189 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 POU5F1Q01860 360 aaKnown RBP20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 CD302Q8IX05 232 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 SIX5Q8N196 739 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 FGF14Q92915 247 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 DHX58Q96C10 678 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 OXCT2Q9BYC2 517 aaPredicted RBP20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 ZHX3Q9H4I2 956 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 FBXL21Q9UKT6 434 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 ANK1P16157 1881 aa20.56■□□□□ 0.88
TMEM88B-201ENST00000378821 PROB1E7EW31 1015 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 PI15O43692 258 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 NMT1P30419 496 aaKnown RBP20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 MCM4P33991 863 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 PPP2R3AQ06190 1150 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 CTXN3Q4LDR2 81 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 PABPC1LQ4VXU2 614 aaKnown RBP20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 SPATA1Q5VX52 437 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 PHLDB3Q6NSJ2 640 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 PARM1Q6UWI2 310 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 MTSS1LQ765P7 747 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 ZNF720Q7Z2F6 126 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 BEST2Q8NFU1 509 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 DNAJC19Q96DA6 116 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 KIF12Q96FN5 646 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 RTP3Q9BQQ7 232 aa20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 RPP25Q9BUL9 199 aaKnown RBP20.55■□□□□ 0.88
TMEM88B-201ENST00000378821 RPF1Q9H9Y2 349 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms