RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 I3L4J1 428 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 ADAM12O43184 909 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 TRAPPC3O43617 180 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 OR1D2P34982 312 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 TYRO3Q06418 890 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 HTR4Q13639 388 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 KCNK18Q7Z418 384 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 DRC1Q96MC2 740 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 UROC1Q96N76 676 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 GSDMAQ96QA5 445 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 C7orf25Q9BPX7 421 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
PRPF18-202ENST00000378572 KMT5AQ9NQR1 393 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 CDH7Q9ULB5 785 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 CDY1Q9Y6F8 540 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 PROB1E7EW31 1015 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 E9PMD0 336 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 HIP1RO75146 1068 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 CAVIN2O95810 425 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 STX1AQ16623 288 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 DCLRE1AQ6PJP8 1040 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 GRAMD1CQ8IYS0 662 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 CEP120Q8N960 986 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 CDT1Q9H211 546 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 ANO10Q9NW15 660 aa14.97□□□□□ -0.01
PRPF18-202ENST00000378572 ZFP37Q9Y6Q3 630 aaPredicted RBP14.97□□□□□ -0.01
PRPF18-202ENST00000378572 DOCK8Q8NF50 2099 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 TKTP29401 623 aaKnown RBP14.96□□□□□ -0.01
PRPF18-202ENST00000378572 MATR3P43243 847 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF18-202ENST00000378572 NPTX2P47972 431 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 ARPP19P56211 112 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 NAB2Q15742 525 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 MTSS1LQ765P7 747 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 SYT2Q8N9I0 419 aaPredicted RBP14.96□□□□□ -0.01
PRPF18-202ENST00000378572 ING5Q8WYH8 240 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 PPP1R10Q96QC0 940 aaKnown RBP14.96□□□□□ -0.01
PRPF18-202ENST00000378572 TRIM9Q9C026 710 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 ANKFY1Q9P2R3 1169 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 TNFSF13BQ9Y275 285 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.01
PRPF18-202ENST00000378572 DCNP07585 359 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 PLA2G4BP0C869 781 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 FGFR3P22607 806 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ELF1P32519 619 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 GRM5P41594 1212 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 BRCC3P46736 316 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 NLRP12P59046 1061 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 RAD51AP2Q09MP3 1159 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 STRN3Q13033 797 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 CUL4BQ13620 913 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 MCM6Q14566 821 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 KCNB1Q14721 858 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 PABPC1LQ4VXU2 614 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 PARM1Q6UWI2 310 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ANKS3Q6ZW76 656 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 GAS2L3Q86XJ1 694 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ERCC4Q92889 916 aaPredicted RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 FGF13Q92913 245 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 RUSC1Q9BVN2 902 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 TARS2Q9BW92 718 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 RMND1Q9NWS8 449 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 HCFC1R1Q9NWW0 138 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 MTRRQ9UBK8 725 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 VWA8A3KMH1 1905 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 SMIM28A0A1B0GU29 152 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ANHXE9PGG2 379 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 TMEM189-UBE2V1I3L0A0 370 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 PODXLO00592 558 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 PRRG1O14668 218 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 SLC16A4O15374 487 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 HOXA9P31269 272 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 SLC12A3P55017 1021 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 RAB33AQ14088 237 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ITFG1Q8TB96 612 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 FGF14Q92915 247 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 ACO2Q99798 780 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 KXD1Q9BQD3 176 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 FOXQ1Q9C009 403 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 MAN1B1Q9UKM7 699 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 MRPS23Q9Y3D9 190 aaKnown RBP14.95□□□□□ -0.02
PRPF18-202ENST00000378572 SIT1Q9Y3P8 196 aa14.95□□□□□ -0.02
PRPF18-202ENST00000378572 LRG1P02750 347 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 IGFBP6P24592 240 aaPredicted RBP14.94□□□□□ -0.02
PRPF18-202ENST00000378572 MORC3Q14149 939 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 UPP1Q16831 310 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 ADSSL1Q8N142 457 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 C3orf58Q8NDZ4 430 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 SHDQ96IW2 340 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 ACAP3Q96P50 834 aa14.94□□□□□ -0.02
PRPF18-202ENST00000378572 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
PRPF18-202ENST00000378572 PVALEFA0A1B0GWK0 134 aa14.93□□□□□ -0.02
PRPF18-202ENST00000378572 MYMKA6NI61 221 aa14.93□□□□□ -0.02
PRPF18-202ENST00000378572 PAPLNO95428 1278 aa14.93□□□□□ -0.02
PRPF18-202ENST00000378572 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
PRPF18-202ENST00000378572 MCF2P10911 925 aa14.93□□□□□ -0.02
PRPF18-202ENST00000378572 GPC5P78333 572 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms