RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 UBA3Q8TBC4 463 aa16.33■□□□□ 0.21
PPM1B-204ENST00000378551 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.21
PPM1B-204ENST00000378551 ARMCX1Q9P291 453 aa16.33■□□□□ 0.21
PPM1B-204ENST00000378551 FBXO40Q9UH90 709 aa16.33■□□□□ 0.21
PPM1B-204ENST00000378551 NR3C2P08235 984 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 CDH6P55285 790 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 NLRP11P59045 1033 aaKnown RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 COPS2P61201 443 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 UGCGQ16739 394 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 FAM102AQ5T9C2 384 aaPredicted RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 CAPRIN2Q6IMN6 1127 aaKnown RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 C11orf63Q6NUN7 778 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 HES6Q96HZ4 224 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 AKT3Q9Y243 479 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 ALDH18A1P54886 795 aaKnown RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 NCOA4Q13772 614 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 GPAT2Q6NUI2 795 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 SLC25A41Q8N5S1 370 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 ATP6V0A4Q9HBG4 840 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 DNPEPQ9ULA0 475 aa16.33■□□□□ 0.2
PPM1B-204ENST00000378551 DIS3Q9Y2L1 958 aaKnown RBP16.33■□□□□ 0.2
PPM1B-204ENST00000378551 LPXNO60711 386 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 HAUS5O94927 633 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 HOXD13P35453 343 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 RUBCNQ92622 972 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 GBP5Q96PP8 586 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 FAM111AQ96PZ2 611 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 OLFML3Q9NRN5 406 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 PHTF1Q9UMS5 762 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 UBE4BO95155 1302 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 LOC100653049A0A140TA62 436 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 EIF3DO15371 548 aaKnown RBP eCLIP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 KRT34O76011 436 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 FSBPO95073 299 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 CPP00450 1065 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 PSAPP07602 524 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 JAG1P78504 1218 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 EME2A4GXA9 379 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ZBED1O96006 694 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 EPHB2P29323 1055 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ARFIP2P53365 341 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 TMCO4Q5TGY1 634 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 DUPD1Q68J44 220 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 NAIF1Q69YI7 327 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 MTDHQ86UE4 582 aaKnown RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 BBOF1Q8ND07 529 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 RNF34Q969K3 372 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 TRIM55Q9BYV6 548 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
PPM1B-204ENST00000378551 IFT122Q9HBG6 1241 aa16.32■□□□□ 0.2
PPM1B-204ENST00000378551 C2orf71A6NGG8 1288 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 F8VP50 259 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 COPEO14579 308 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 ITIH2P19823 946 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 RPL7AP62424 266 aaKnown RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 BMPR2Q13873 1038 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 ACAD10Q6JQN1 1059 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 MTMR12Q9C0I1 747 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 RAB6BQ9NRW1 208 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 NINJ2Q9NZG7 142 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 NID2Q14112 1375 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 hCG_2014768A0A024R1R8 64 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 M0QYV0 167 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 TTC4O95801 387 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 CYP3A4P08684 503 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 NRLP54845 237 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 ZNF568Q3ZCX4 644 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 MFSD7Q6UXD7 560 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 UBTFL6P0CB48 400 aaPredicted RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 PRKCIP41743 596 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 ARL4CP56559 192 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 TMEM62Q0P6H9 643 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 NFX1Q12986 1120 aaKnown RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 AMHR2Q16671 573 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 KREMEN1Q96MU8 473 aa16.31■□□□□ 0.2
PPM1B-204ENST00000378551 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
PPM1B-204ENST00000378551 TAF1P21675 1872 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TRPA1O75762 1119 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 KRT16P08779 473 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 CCND2P30279 289 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 SLC20A2Q08357 652 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms