RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.92■■□□□ 1.26
VSX1-201ENST00000376707 TTC26A0AVF1 554 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 TRAK2O60296 914 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 TBCAO75347 108 aaKnown RBP22.91■■□□□ 1.26
VSX1-201ENST00000376707 PTPN2P17706 415 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 TNFSF9P41273 254 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 TPGS2Q68CL5 300 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 FRMD5Q7Z6J6 570 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 TCEAL8Q8IYN2 117 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 DDX12PQ92771 950 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 SHDQ96IW2 340 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 KXD1Q9BQD3 176 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 UBQLN1Q9UMX0 589 aaKnown RBP22.91■■□□□ 1.26
VSX1-201ENST00000376707 SIT1Q9Y3P8 196 aa22.91■■□□□ 1.26
VSX1-201ENST00000376707 OGTO15294 1046 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 XPOTO43592 962 aaKnown RBP22.9■■□□□ 1.26
VSX1-201ENST00000376707 SEC24AO95486 1093 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 ZNF131P52739 623 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 SLC5A9Q2M3M2 681 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 SPECC1Q5M775 1068 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 LARP4BQ92615 738 aaKnown RBP22.9■■□□□ 1.26
VSX1-201ENST00000376707 MCRS1Q96EZ8 462 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 CORO1BQ9BR76 489 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 RPF1Q9H9Y2 349 aaKnown RBP22.9■■□□□ 1.26
VSX1-201ENST00000376707 AVENQ9NQS1 362 aaPredicted RBP22.9■■□□□ 1.26
VSX1-201ENST00000376707 GDE1Q9NZC3 331 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 INSL5Q9Y5Q6 135 aa22.9■■□□□ 1.26
VSX1-201ENST00000376707 CITO14578 2027 aa22.89■■□□□ 1.26
VSX1-201ENST00000376707 MYH11P35749 1972 aa22.89■■□□□ 1.26
VSX1-201ENST00000376707 LACTBL1A8MY62 500 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 PIGRP01833 764 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 CPB1P15086 417 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 CYP3A5P20815 502 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 SYT1P21579 422 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 LRPAP1P30533 357 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 ABCD1P33897 745 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 ASCL5Q7RTU5 278 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 ELMOD1Q8N336 334 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 MSTO1Q9BUK6 570 aa22.89■■□□□ 1.25
VSX1-201ENST00000376707 PRR23AA6NEV1 266 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 DCNP07585 359 aaKnown RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 PFKPQ01813 784 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 YWHAHQ04917 246 aaPredicted RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 ADCY1Q08828 1119 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 SNW1Q13573 536 aaKnown RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 ZBTB6Q15916 424 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 ENOX2Q16206 610 aaKnown RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 ZBTB41Q5SVQ8 909 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 TMEM130Q8N3G9 435 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 NKD2Q969F2 451 aaPredicted RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 FAM212AQ96EL1 285 aa22.88■■□□□ 1.25
VSX1-201ENST00000376707 AFF4Q9UHB7 1163 aaKnown RBP22.88■■□□□ 1.25
VSX1-201ENST00000376707 DOCK6Q96HP0 2047 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 ZFHX2Q9C0A1 2572 aaPredicted RBP22.87■■□□□ 1.25
VSX1-201ENST00000376707 M0QZQ0 153 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 FAM189A1O60320 539 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 CEBPBP17676 345 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 STARD6P59095 220 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 RESTQ13127 1097 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 PTPAQ15257 358 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 IQCEQ6IPM2 695 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 DSTYKQ6XUX3 929 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 PDZD4Q76G19 769 aaPredicted RBP22.87■■□□□ 1.25
VSX1-201ENST00000376707 USP37Q86T82 979 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 KRI1Q8N9T8 703 aaKnown RBP22.87■■□□□ 1.25
VSX1-201ENST00000376707 PJA1Q8NG27 643 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 TSPAN18Q96SJ8 248 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 FOXQ1Q9C009 403 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 CCSER1Q9C0I3 900 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 MAFFQ9ULX9 164 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 TIMM13Q9Y5L4 95 aaPredicted RBP22.87■■□□□ 1.25
VSX1-201ENST00000376707 CLIC4Q9Y696 253 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 USP34Q70CQ2 3546 aa22.87■■□□□ 1.25
VSX1-201ENST00000376707 A0A0B4J269 797 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 ZNF197O14709 1029 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 ECI2O75521 394 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 NMT1P30419 496 aaKnown RBP22.86■■□□□ 1.25
VSX1-201ENST00000376707 DDIT3P35638 169 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 GUCY2FP51841 1108 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 GTF2BQ00403 316 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 MLF2Q15773 248 aaPredicted RBP22.86■■□□□ 1.25
VSX1-201ENST00000376707 SLC44A4Q53GD3 710 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 CYP4A22Q5TCH4 519 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 MAP4K3Q8IVH8 894 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 CD302Q8IX05 232 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 BEST2Q8NFU1 509 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 EPSTI1Q96J88 318 aa22.86■■□□□ 1.25
VSX1-201ENST00000376707 ZNF512Q96ME7 567 aaPredicted RBP22.86■■□□□ 1.25
VSX1-201ENST00000376707 OXCT2Q9BYC2 517 aaPredicted RBP22.86■■□□□ 1.25
VSX1-201ENST00000376707 K7ELQ4 463 aaPredicted RBP22.85■■□□□ 1.25
VSX1-201ENST00000376707 OAZ2O95190 189 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 AARSP49588 968 aaKnown RBP eCLIP22.85■■□□□ 1.25
VSX1-201ENST00000376707 PRKCQQ04759 706 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 TWF1Q12792 350 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 PRSS36Q5K4E3 855 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 SLC39A4Q6P5W5 647 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 RNF19BQ6ZMZ0 732 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 TCEAL4Q96EI5 215 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 FIZ1Q96SL8 496 aa22.85■■□□□ 1.25
VSX1-201ENST00000376707 DLGAP2Q9P1A6 1054 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms