RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 LRRC41Q15345 812 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ANO4Q32M45 955 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 CNGB3Q9NQW8 809 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 SQORQ9Y6N5 450 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 KDM6AO15550 1401 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FAM58BPP0C7Q3 252 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 POLD1P28340 1107 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PSMC5P62195 406 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ANKRD40Q6AI12 368 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 RAD9BQ6WBX8 426 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 NCAPG2Q86XI2 1143 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 MIEF2Q96C03 454 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TRIM49BA6NDI0 452 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 LSM8O95777 96 aaKnown RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PTENP60484 403 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ITGA9Q13797 1035 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 STK32AQ8WU08 396 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FRMPD2Q68DX3 1309 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 RC3H1Q5TC82 1133 aaKnown RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PADI6Q6TGC4 694 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 COG4Q9H9E3 785 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ALBP02768 609 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 HSD17B4P51659 736 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 EPHA7Q15375 998 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 CENPPQ6IPU0 288 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PPM1NQ8N819 430 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 ZC3H7BQ9UGR2 993 aaKnown RBP10.68□□□□□ -0.7
PTCH1-204ENST00000375290 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 COBLO75128 1261 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 MAGEA4P43358 317 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 SP4Q02446 784 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 DUOXA2Q1HG44 320 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 TMEM8AQ9HCN3 771 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 DGAT1O75907 488 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FGFR4P22455 802 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 PTK7Q13308 1070 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 APOL4Q9BPW4 351 aa10.68□□□□□ -0.7
PTCH1-204ENST00000375290 FAM237AA0A1B0GTK4 181 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ATP6V1E1P36543 226 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ITKQ08881 620 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 TMEM270Q6UE05 265 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 RHPN2Q8IUC4 686 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 NIM1KQ8IY84 436 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 SCFD2Q8WU76 684 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ILKAPQ9H0C8 392 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ACADSBP45954 432 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 COA1Q9GZY4 146 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 PHTF1Q9UMS5 762 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 TFAMQ00059 246 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 NEK10Q6ZWH5 1172 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 GTSE1Q9NYZ3 720 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ZMYM2Q9UBW7 1377 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 C15orf38-AP3S2A0A0A6YYH1 394 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ZBBXA8MT70 800 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 SAT1P21673 171 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 PHKA2P46019 1235 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 PPM1FP49593 454 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ARPINQ7Z6K5 226 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 MCUQ8NE86 351 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 NCAM2O15394 837 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ZNF135P52742 658 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 DNAJC3Q13217 504 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ARMCX4Q5H9R4 360 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 PRPF39Q86UA1 669 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 SFR1Q86XK3 245 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 GLYCTKQ8IVS8 523 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 NOA1Q8NC60 698 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 RABGEF1Q9UJ41 708 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 CSADQ9Y600 493 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 MAGEB16A2A368 324 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 AKAP10O43572 662 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 RALBP11234 206 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 GYG1P46976 350 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 CDK8P49336 464 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 KDSRQ06136 332 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 RAPGEF5Q92565 580 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 THTPAQ9BU02 230 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 HERC5Q9UII4 1024 aaKnown RBP10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ADAM30Q9UKF2 790 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 B2RBV5 119 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 CLIC2O15247 247 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 DTNBO60941 627 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ACTR2P61160 394 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 CCDC153Q494R4 210 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 METTL13Q8N6R0 699 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 ANKZF1Q9H8Y5 726 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 WDR91A4D1P6 747 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 KRT72Q14CN4 511 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 CPXCR1Q8N123 301 aa10.67□□□□□ -0.7
PTCH1-204ENST00000375290 SVOPQ8N4V2 548 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms