RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RSPH3Q86UC2 560 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 ARHGEF26Q96DR7 871 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 B2RBV5 119 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 MSH4O15457 936 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 HUS1O60921 280 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 AP1B1Q10567 949 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 MEA1Q16626 185 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 TMEM259Q4ZIN3 620 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 TEDDM1Q5T9Z0 273 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 DSTYKQ6XUX3 929 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 RUSC1Q9BVN2 902 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 INTS13Q9NVM9 706 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 DIP2AQ14689 1571 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 APOL1O14791 398 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 CST8O60676 142 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 PYGBP11216 843 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 EEF1DP29692 281 aaKnown RBP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 PTK7Q13308 1070 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 THTPAQ9BU02 230 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 TRIM15Q9C019 465 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 XPO7Q9UIA9 1087 aaKnown RBP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.47
PTCH1-203ENST00000375274 ITIH4Q14624 930 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 LRRC36Q1X8D7 754 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 PLA2G4FQ68DD2 849 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 CREG2Q8IUH2 290 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 PI4K2AQ9BTU6 479 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.47
PTCH1-203ENST00000375274 MTO1Q9Y2Z2 717 aaKnown RBP12.15□□□□□ -0.47
PTCH1-203ENST00000375274 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 A0A0A6YYK5 440 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 GIT2Q14161 759 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 FOXR1Q6PIV2 292 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 ZNF677Q86XU0 584 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 AENQ8WTP8 325 aaKnown RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 ATXN7L3BQ96GX2 97 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 SPAG6O75602 509 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 MCF2P10911 925 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 NQO1P15559 274 aaKnown RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 SNRPFP62306 86 aaKnown RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
PTCH1-203ENST00000375274 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 ATP8B4Q8TF62 1192 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 AGLP35573 1532 aa12.14□□□□□ -0.47
PTCH1-203ENST00000375274 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ITGA4P13612 1032 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 KCNA3P22001 575 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ACAD10Q6JQN1 1059 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 FEZF2Q8TBJ5 459 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ARHGEF37A1IGU5 675 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 A8MXQ7 604 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 SMAPO00193 183 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 GZMAP12544 262 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 STAT5BP51692 787 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 EFHC2Q5JST6 749 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 MOXD1Q6UVY6 613 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 DNAAF5Q86Y56 855 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ING2Q9H160 280 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 CDC42EP4Q9H3Q1 356 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 WARS2Q9UGM6 360 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 F8VZ95 297 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 ENTPD3O75355 529 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 NR3C2P08235 984 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 WEE2P0C1S8 567 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 FAM153BP0C7A2 387 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 PDCD2Q16342 344 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 FAM153CQ494X1 144 aa12.13□□□□□ -0.47
PTCH1-203ENST00000375274 SPOUT1Q5T280 376 aaKnown RBP12.13□□□□□ -0.47
PTCH1-203ENST00000375274 TTC8Q8TAM2 541 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms